Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences

Abstract Background Shotgun metagenomic sequencing reveals the potential in microbial communities. However, lower-cost 16S ribosomal RNA (rRNA) gene sequencing provides taxonomic, not functional, observations. To remedy this, we previously introduced Piphillin, a software package that predicts funct...

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Autors principals:	Nicole R. Narayan, Thomas Weinmaier, Emilio J. Laserna-Mendieta, Marcus J. Claesson, Fergus Shanahan, Karim Dabbagh, Shoko Iwai, Todd Z. DeSantis
Format:	Artigo
Idioma:	Inglês
Publicat:	BMC 2020-01-01
Col·lecció:	BMC Genomics
Matèries:	Metagenomics Phylogenetic analysis Sequence alignment Shotgun sequencing Genomic databases
Accés en línia:	https://doi.org/10.1186/s12864-019-6427-1
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