Overcoming challenges in metagenomic AMR surveillance with nanopore sequencing: a case study on fluoroquinolone resistance

IntroductionAntimicrobial resistance is an alarming public health problem, and comprehensive surveillance across environments is required to reduce its impact. Phenotypic testing and whole-genome sequencing of isolates are efficient, but culture-free approaches like metagenomic sequencing potentiall...

ver descrição completa

Detalhes bibliográficos

Principais autores:	Bram Bloemen, Mathieu Gand, Moniek Ringenier, Bert Bogaerts, Kevin Vanneste, Kathleen Marchal, Nancy H. C. Roosens, Jeroen Dewulf, Filip Boyen, Sigrid C. J. De Keersmaecker
Formato:	Artigo
Idioma:	Inglês
Publicado em:	Frontiers Media S.A. 2025-07-01
coleção:	Frontiers in Microbiology
Assuntos:	metagenomic sequencing antimicrobial resistance (AMR) nanopore sequencing DNA methylation strain-resolved metagenomics plasmid host prediction
Acesso em linha:	https://www.frontiersin.org/articles/10.3389/fmicb.2025.1614301/full
Tags:	Adicionar Tag Sem tags, seja o primeiro a adicionar uma tag!