SamSelect: a sample sequence selection algorithm for quorum planted motif search on large DNA datasets
Abstract Background Given a set of t n-length DNA sequences, q satisfying 0 < q ≤ 1, and l and d satisfying 0 ≤ d < l < n, the quorum planted motif search (qPMS) finds l-length strings that occur in at least qt input sequences with up to d mismatches and is mainly used to locate transcription factor...
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| Principais autores: | , , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
BMC
2018-06-01
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| coleção: | BMC Bioinformatics |
| Assuntos: | |
| Acesso em linha: | http://link.springer.com/article/10.1186/s12859-018-2242-y |
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