Characterization of Antimicrobial Resistance Dissemination across Plasmid Communities Classified by Network Analysis

od Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kuroda, Makoto
Izdano u Pathogens (2014)

VirusTAP: Viral Genome-Targeted Assembly Pipeline

od Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kuroda, Makoto
Izdano u Front Microbiol (2016)

Pyrosequence Read Length of 16S rRNA Gene Affects Phylogenetic Assignment of Plant-associated Bacteria

od Okubo, Takashi, Ikeda, Seishi, Yamashita, Akifumi, Terasawa, Kimihiro, Minamisawa, Kiwamu
Izdano 2012

Conventional culture methods with commercially available media unveil the presence of novel culturable bacteria

od Ito, Tamaki, Sekizuka, Tsuyoshi, Kishi, Norimi, Yamashita, Akifumi, Kuroda, Makoto
Izdano u Gut Microbes (2018)

Characterization of the gut microbiota of Kawasaki disease patients by metagenomic analysis

od Kinumaki, Akiko, Sekizuka, Tsuyoshi, Hamada, Hiromichi, Kato, Kengo, Yamashita, Akifumi, Kuroda, Makoto
Izdano u Front Microbiol (2015)

DGV: Dengue Genographic Viewer

od Yamashita, Akifumi, Sakamoto, Tetsuya, Sekizuka, Tsuyoshi, Kato, Kengo, Takasaki, Tomohiko, Kuroda, Makoto
Izdano u Front Microbiol (2016)

TGS-TB: Total Genotyping Solution for Mycobacterium tuberculosis Using Short-Read Whole-Genome Sequencing

od Sekizuka, Tsuyoshi, Yamashita, Akifumi, Murase, Yoshiro, Iwamoto, Tomotada, Mitarai, Satoshi, Kato, Seiya, Kuroda, Makoto
Izdano u PLoS One (2015)

Induction of Anti-influenza Immunity by Modified Green Fluorescent Protein (GFP) Carrying Hemagglutinin-derived Epitope Structure

od Inoue, Yuji, Kubota-Koketsu, Ritsuko, Yamashita, Akifumi, Nishimura, Mitsuhiro, Ideno, Shoji, Ono, Ken-ichiro, Okuno, Yoshinobu, Ikuta, Kazuyoshi
Izdano 2013

Low Levels of Antibody-Dependent Enhancement in Vitro Using Viruses and Plasma from Dengue Patients

od Chaichana, Panjaporn, Okabayashi, Tamaki, Puiprom, Orapim, Sasayama, Mikiko, Sasaki, Tadahiro, Yamashita, Akifumi, Ramasoota, Pongrama, Kurosu, Takeshi, Ikuta, Kazuyoshi
Izdano 2014

Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and...

od Hasegawa, Noriko, Sekizuka, Tsuyoshi, Sugi, Yutaka, Kawakami, Nobuhiro, Ogasawara, Yumiko, Kato, Kengo, Yamashita, Akifumi, Takeuchi, Fumihiko, Kuroda, Makoto
Izdano u Infect Immun (2017)

Elucidation of quantitative structural diversity of remarkable rearrangement regions, shufflons, in IncI2 plasmids

od Sekizuka, Tsuyoshi, Kawanishi, Michiko, Ohnishi, Mamoru, Shima, Ayaka, Kato, Kengo, Yamashita, Akifumi, Matsui, Mari, Suzuki, Satowa, Kuroda, Makoto
Izdano u Sci Rep (2017)

The Type III Secretion System of Bradyrhizobium japonicum USDA122 Mediates Symbiotic Incompatibility with Rj2 Soybean Plants

od Tsukui, Takahiro, Eda, Shima, Kaneko, Takakazu, Sato, Shusei, Okazaki, Shin, Kakizaki-Chiba, Kaori, Itakura, Manabu, Mitsui, Hisayuki, Yamashita, Akifumi, Terasawa, Kimihiro, Minamisawa, Kiwamu
Izdano 2013

Molecular Evolution of HIV-1 CRF01_AE Env in Thai Patients

od Boonchawalit, Samatchaya, Jullaksorn, Duangrat, Uttiyoung, Jiraporn, Yowang, Amara, Krathong, Nongkran, Chautrakul, Sununta, Yamashita, Akifumi, Ikuta, Kazuyoshi, Roobsoong, Amornsak, Kanitvittaya, Sangkom, Sawanpanyalert, Pathom, Kameoka, Masanori
Izdano 2011

Limited cross-reactivity of mouse monoclonal antibodies against Dengue virus capsid protein among four serotypes

od Noda, Megumi, Masrinoul, Promsin, Punkum, Chaweewan, Pipattanaboon, Chonlatip, Ramasoota, Pongrama, Setthapramote, Chayanee, Sasaki, Tadahiro, Sasayama, Mikiko, Yamashita, Akifumi, Kurosu, Takeshi, Ikuta, Kazuyoshi, Okabayashi, Tamaki
Izdano 2012

Overcoming the pitfalls of automatic interpretation of whole genome sequencing data by online tools for the prediction of pyrazinamide resistance in Mycobacterium tuberculosis

od Iwamoto, Tomotada, Murase, Yoshiro, Yoshida, Shiomi, Aono, Akio, Kuroda, Makoto, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kato, Kengo, Takii, Takemasa, Arikawa, Kentaro, Kato, Seiya, Mitarai, Satoshi
Izdano u PLoS One (2019)

Emerging Antigenic Variants at the Antigenic Site Sb in Pandemic A(H1N1)2009 Influenza Virus in Japan Detected by a Human Monoclonal Antibody

od Yasugi, Mayo, Kubota-Koketsu, Ritsuko, Yamashita, Akifumi, Kawashita, Norihito, Du, Anariwa, Misaki, Ryo, Kuhara, Motoki, Boonsathorn, Naphatsawan, Fujiyama, Kazuhito, Okuno, Yoshinobu, Nakaya, Takaaki, Ikuta, Kazuyoshi
Izdano 2013

A Highly Conserved Region Between Amino Acids 221 and 266 of Dengue Virus Non-Structural Protein 1 Is a Major Epitope Region in Infected Patients

od Omokoko, Magot Diata, Pambudi, Sabar, Phanthanawiboon, Supranee, Masrinoul, Promsin, Setthapramote, Chayanee, Sasaki, Tadahiro, Kuhara, Motoki, Ramasoota, Pongrama, Yamashita, Akifumi, Hirai, Itaru, Ikuta, Kazuyoshi, Kurosu, Takeshi
Izdano 2014

Prevalence of Colistin Resistance Gene mcr-1 and Absence of mcr-2 in Escherichia coli Isolated from Healthy Food-Producing Animals in Japan

od Kawanishi, Michiko, Abo, Hitoshi, Ozawa, Manao, Uchiyama, Mariko, Shirakawa, Takahiro, Suzuki, Satowa, Shima, Ayaka, Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kato, Kengo, Kuroda, Makoto, Koike, Ryoji, Kijima, Mayumi
Izdano u Antimicrob Agents Chemother (2016)

Molecular Evolution of the VP1 Gene in Human Norovirus GII.4 Variants in 1974–2015

od Motoya, Takumi, Nagasawa, Koo, Matsushima, Yuki, Nagata, Noriko, Ryo, Akihide, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kuroda, Makoto, Morita, Yukio, Suzuki, Yoshiyuki, Sasaki, Nobuya, Katayama, Kazuhiko, Kimura, Hirokazu
Izdano u Front Microbiol (2017)

Whole-genome sequencing-based epidemiological analysis of anti-tuberculosis drug resistance genes in Japan in 2007: Application of the Genome Research for Asian Tuberculosis (GReAT...

od Takii, Takemasa, Seki, Kouhei, Wakabayashi, Yasutaka, Morishige, Yuta, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kato, Kengo, Uchimura, Kazuhiro, Ohkado, Akihiro, Keicho, Naoto, Mitarai, Satoshi, Kuroda, Makoto, Kato, Seiya
Izdano u Sci Rep (2019)