Characterization of Antimicrobial Resistance Dissemination across Plasmid Communities Classified by Network Analysis

Por Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kuroda, Makoto
Publicado no Pathogens (2014)

VirusTAP: Viral Genome-Targeted Assembly Pipeline

Por Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kuroda, Makoto
Publicado no Front Microbiol (2016)

Pyrosequence Read Length of 16S rRNA Gene Affects Phylogenetic Assignment of Plant-associated Bacteria

Por Okubo, Takashi, Ikeda, Seishi, Yamashita, Akifumi, Terasawa, Kimihiro, Minamisawa, Kiwamu
Publicado em 2012

Conventional culture methods with commercially available media unveil the presence of novel culturable bacteria

Por Ito, Tamaki, Sekizuka, Tsuyoshi, Kishi, Norimi, Yamashita, Akifumi, Kuroda, Makoto
Publicado no Gut Microbes (2018)

Characterization of the gut microbiota of Kawasaki disease patients by metagenomic analysis

Por Kinumaki, Akiko, Sekizuka, Tsuyoshi, Hamada, Hiromichi, Kato, Kengo, Yamashita, Akifumi, Kuroda, Makoto
Publicado no Front Microbiol (2015)

DGV: Dengue Genographic Viewer

Por Yamashita, Akifumi, Sakamoto, Tetsuya, Sekizuka, Tsuyoshi, Kato, Kengo, Takasaki, Tomohiko, Kuroda, Makoto
Publicado no Front Microbiol (2016)

TGS-TB: Total Genotyping Solution for Mycobacterium tuberculosis Using Short-Read Whole-Genome Sequencing

Por Sekizuka, Tsuyoshi, Yamashita, Akifumi, Murase, Yoshiro, Iwamoto, Tomotada, Mitarai, Satoshi, Kato, Seiya, Kuroda, Makoto
Publicado no PLoS One (2015)

Induction of Anti-influenza Immunity by Modified Green Fluorescent Protein (GFP) Carrying Hemagglutinin-derived Epitope Structure

Por Inoue, Yuji, Kubota-Koketsu, Ritsuko, Yamashita, Akifumi, Nishimura, Mitsuhiro, Ideno, Shoji, Ono, Ken-ichiro, Okuno, Yoshinobu, Ikuta, Kazuyoshi
Publicado em 2013

Low Levels of Antibody-Dependent Enhancement in Vitro Using Viruses and Plasma from Dengue Patients

Por Chaichana, Panjaporn, Okabayashi, Tamaki, Puiprom, Orapim, Sasayama, Mikiko, Sasaki, Tadahiro, Yamashita, Akifumi, Ramasoota, Pongrama, Kurosu, Takeshi, Ikuta, Kazuyoshi
Publicado em 2014

Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and...

Por Hasegawa, Noriko, Sekizuka, Tsuyoshi, Sugi, Yutaka, Kawakami, Nobuhiro, Ogasawara, Yumiko, Kato, Kengo, Yamashita, Akifumi, Takeuchi, Fumihiko, Kuroda, Makoto
Publicado no Infect Immun (2017)

Elucidation of quantitative structural diversity of remarkable rearrangement regions, shufflons, in IncI2 plasmids

Por Sekizuka, Tsuyoshi, Kawanishi, Michiko, Ohnishi, Mamoru, Shima, Ayaka, Kato, Kengo, Yamashita, Akifumi, Matsui, Mari, Suzuki, Satowa, Kuroda, Makoto
Publicado no Sci Rep (2017)

The Type III Secretion System of Bradyrhizobium japonicum USDA122 Mediates Symbiotic Incompatibility with Rj2 Soybean Plants

Por Tsukui, Takahiro, Eda, Shima, Kaneko, Takakazu, Sato, Shusei, Okazaki, Shin, Kakizaki-Chiba, Kaori, Itakura, Manabu, Mitsui, Hisayuki, Yamashita, Akifumi, Terasawa, Kimihiro, Minamisawa, Kiwamu
Publicado em 2013

Molecular Evolution of HIV-1 CRF01_AE Env in Thai Patients

Por Boonchawalit, Samatchaya, Jullaksorn, Duangrat, Uttiyoung, Jiraporn, Yowang, Amara, Krathong, Nongkran, Chautrakul, Sununta, Yamashita, Akifumi, Ikuta, Kazuyoshi, Roobsoong, Amornsak, Kanitvittaya, Sangkom, Sawanpanyalert, Pathom, Kameoka, Masanori
Publicado em 2011

Limited cross-reactivity of mouse monoclonal antibodies against Dengue virus capsid protein among four serotypes

Por Noda, Megumi, Masrinoul, Promsin, Punkum, Chaweewan, Pipattanaboon, Chonlatip, Ramasoota, Pongrama, Setthapramote, Chayanee, Sasaki, Tadahiro, Sasayama, Mikiko, Yamashita, Akifumi, Kurosu, Takeshi, Ikuta, Kazuyoshi, Okabayashi, Tamaki
Publicado em 2012

Overcoming the pitfalls of automatic interpretation of whole genome sequencing data by online tools for the prediction of pyrazinamide resistance in Mycobacterium tuberculosis

Por Iwamoto, Tomotada, Murase, Yoshiro, Yoshida, Shiomi, Aono, Akio, Kuroda, Makoto, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kato, Kengo, Takii, Takemasa, Arikawa, Kentaro, Kato, Seiya, Mitarai, Satoshi
Publicado no PLoS One (2019)

Emerging Antigenic Variants at the Antigenic Site Sb in Pandemic A(H1N1)2009 Influenza Virus in Japan Detected by a Human Monoclonal Antibody

Por Yasugi, Mayo, Kubota-Koketsu, Ritsuko, Yamashita, Akifumi, Kawashita, Norihito, Du, Anariwa, Misaki, Ryo, Kuhara, Motoki, Boonsathorn, Naphatsawan, Fujiyama, Kazuhito, Okuno, Yoshinobu, Nakaya, Takaaki, Ikuta, Kazuyoshi
Publicado em 2013

A Highly Conserved Region Between Amino Acids 221 and 266 of Dengue Virus Non-Structural Protein 1 Is a Major Epitope Region in Infected Patients

Por Omokoko, Magot Diata, Pambudi, Sabar, Phanthanawiboon, Supranee, Masrinoul, Promsin, Setthapramote, Chayanee, Sasaki, Tadahiro, Kuhara, Motoki, Ramasoota, Pongrama, Yamashita, Akifumi, Hirai, Itaru, Ikuta, Kazuyoshi, Kurosu, Takeshi
Publicado em 2014

Prevalence of Colistin Resistance Gene mcr-1 and Absence of mcr-2 in Escherichia coli Isolated from Healthy Food-Producing Animals in Japan

Por Kawanishi, Michiko, Abo, Hitoshi, Ozawa, Manao, Uchiyama, Mariko, Shirakawa, Takahiro, Suzuki, Satowa, Shima, Ayaka, Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kato, Kengo, Kuroda, Makoto, Koike, Ryoji, Kijima, Mayumi
Publicado no Antimicrob Agents Chemother (2016)

Molecular Evolution of the VP1 Gene in Human Norovirus GII.4 Variants in 1974–2015

Por Motoya, Takumi, Nagasawa, Koo, Matsushima, Yuki, Nagata, Noriko, Ryo, Akihide, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kuroda, Makoto, Morita, Yukio, Suzuki, Yoshiyuki, Sasaki, Nobuya, Katayama, Kazuhiko, Kimura, Hirokazu
Publicado no Front Microbiol (2017)

Whole-genome sequencing-based epidemiological analysis of anti-tuberculosis drug resistance genes in Japan in 2007: Application of the Genome Research for Asian Tuberculosis (GReAT...

Por Takii, Takemasa, Seki, Kouhei, Wakabayashi, Yasutaka, Morishige, Yuta, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kato, Kengo, Uchimura, Kazuhiro, Ohkado, Akihiro, Keicho, Naoto, Mitarai, Satoshi, Kuroda, Makoto, Kato, Seiya
Publicado no Sci Rep (2019)