Characterization of Antimicrobial Resistance Dissemination across Plasmid Communities Classified by Network Analysis

מאת Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kuroda, Makoto
הוצא לאור ב Pathogens (2014)

VirusTAP: Viral Genome-Targeted Assembly Pipeline

מאת Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kuroda, Makoto
הוצא לאור ב Front Microbiol (2016)

Pyrosequence Read Length of 16S rRNA Gene Affects Phylogenetic Assignment of Plant-associated Bacteria

מאת Okubo, Takashi, Ikeda, Seishi, Yamashita, Akifumi, Terasawa, Kimihiro, Minamisawa, Kiwamu
יצא לאור 2012

Conventional culture methods with commercially available media unveil the presence of novel culturable bacteria

מאת Ito, Tamaki, Sekizuka, Tsuyoshi, Kishi, Norimi, Yamashita, Akifumi, Kuroda, Makoto
הוצא לאור ב Gut Microbes (2018)

Characterization of the gut microbiota of Kawasaki disease patients by metagenomic analysis

מאת Kinumaki, Akiko, Sekizuka, Tsuyoshi, Hamada, Hiromichi, Kato, Kengo, Yamashita, Akifumi, Kuroda, Makoto
הוצא לאור ב Front Microbiol (2015)

DGV: Dengue Genographic Viewer

מאת Yamashita, Akifumi, Sakamoto, Tetsuya, Sekizuka, Tsuyoshi, Kato, Kengo, Takasaki, Tomohiko, Kuroda, Makoto
הוצא לאור ב Front Microbiol (2016)

TGS-TB: Total Genotyping Solution for Mycobacterium tuberculosis Using Short-Read Whole-Genome Sequencing

מאת Sekizuka, Tsuyoshi, Yamashita, Akifumi, Murase, Yoshiro, Iwamoto, Tomotada, Mitarai, Satoshi, Kato, Seiya, Kuroda, Makoto
הוצא לאור ב PLoS One (2015)

Induction of Anti-influenza Immunity by Modified Green Fluorescent Protein (GFP) Carrying Hemagglutinin-derived Epitope Structure

מאת Inoue, Yuji, Kubota-Koketsu, Ritsuko, Yamashita, Akifumi, Nishimura, Mitsuhiro, Ideno, Shoji, Ono, Ken-ichiro, Okuno, Yoshinobu, Ikuta, Kazuyoshi
יצא לאור 2013

Low Levels of Antibody-Dependent Enhancement in Vitro Using Viruses and Plasma from Dengue Patients

מאת Chaichana, Panjaporn, Okabayashi, Tamaki, Puiprom, Orapim, Sasayama, Mikiko, Sasaki, Tadahiro, Yamashita, Akifumi, Ramasoota, Pongrama, Kurosu, Takeshi, Ikuta, Kazuyoshi
יצא לאור 2014

Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and...

מאת Hasegawa, Noriko, Sekizuka, Tsuyoshi, Sugi, Yutaka, Kawakami, Nobuhiro, Ogasawara, Yumiko, Kato, Kengo, Yamashita, Akifumi, Takeuchi, Fumihiko, Kuroda, Makoto
הוצא לאור ב Infect Immun (2017)

Elucidation of quantitative structural diversity of remarkable rearrangement regions, shufflons, in IncI2 plasmids

מאת Sekizuka, Tsuyoshi, Kawanishi, Michiko, Ohnishi, Mamoru, Shima, Ayaka, Kato, Kengo, Yamashita, Akifumi, Matsui, Mari, Suzuki, Satowa, Kuroda, Makoto
הוצא לאור ב Sci Rep (2017)

The Type III Secretion System of Bradyrhizobium japonicum USDA122 Mediates Symbiotic Incompatibility with Rj2 Soybean Plants

מאת Tsukui, Takahiro, Eda, Shima, Kaneko, Takakazu, Sato, Shusei, Okazaki, Shin, Kakizaki-Chiba, Kaori, Itakura, Manabu, Mitsui, Hisayuki, Yamashita, Akifumi, Terasawa, Kimihiro, Minamisawa, Kiwamu
יצא לאור 2013

Molecular Evolution of HIV-1 CRF01_AE Env in Thai Patients

מאת Boonchawalit, Samatchaya, Jullaksorn, Duangrat, Uttiyoung, Jiraporn, Yowang, Amara, Krathong, Nongkran, Chautrakul, Sununta, Yamashita, Akifumi, Ikuta, Kazuyoshi, Roobsoong, Amornsak, Kanitvittaya, Sangkom, Sawanpanyalert, Pathom, Kameoka, Masanori
יצא לאור 2011

Limited cross-reactivity of mouse monoclonal antibodies against Dengue virus capsid protein among four serotypes

מאת Noda, Megumi, Masrinoul, Promsin, Punkum, Chaweewan, Pipattanaboon, Chonlatip, Ramasoota, Pongrama, Setthapramote, Chayanee, Sasaki, Tadahiro, Sasayama, Mikiko, Yamashita, Akifumi, Kurosu, Takeshi, Ikuta, Kazuyoshi, Okabayashi, Tamaki
יצא לאור 2012

Overcoming the pitfalls of automatic interpretation of whole genome sequencing data by online tools for the prediction of pyrazinamide resistance in Mycobacterium tuberculosis

מאת Iwamoto, Tomotada, Murase, Yoshiro, Yoshida, Shiomi, Aono, Akio, Kuroda, Makoto, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kato, Kengo, Takii, Takemasa, Arikawa, Kentaro, Kato, Seiya, Mitarai, Satoshi
הוצא לאור ב PLoS One (2019)

Emerging Antigenic Variants at the Antigenic Site Sb in Pandemic A(H1N1)2009 Influenza Virus in Japan Detected by a Human Monoclonal Antibody

מאת Yasugi, Mayo, Kubota-Koketsu, Ritsuko, Yamashita, Akifumi, Kawashita, Norihito, Du, Anariwa, Misaki, Ryo, Kuhara, Motoki, Boonsathorn, Naphatsawan, Fujiyama, Kazuhito, Okuno, Yoshinobu, Nakaya, Takaaki, Ikuta, Kazuyoshi
יצא לאור 2013

A Highly Conserved Region Between Amino Acids 221 and 266 of Dengue Virus Non-Structural Protein 1 Is a Major Epitope Region in Infected Patients

מאת Omokoko, Magot Diata, Pambudi, Sabar, Phanthanawiboon, Supranee, Masrinoul, Promsin, Setthapramote, Chayanee, Sasaki, Tadahiro, Kuhara, Motoki, Ramasoota, Pongrama, Yamashita, Akifumi, Hirai, Itaru, Ikuta, Kazuyoshi, Kurosu, Takeshi
יצא לאור 2014

Prevalence of Colistin Resistance Gene mcr-1 and Absence of mcr-2 in Escherichia coli Isolated from Healthy Food-Producing Animals in Japan

מאת Kawanishi, Michiko, Abo, Hitoshi, Ozawa, Manao, Uchiyama, Mariko, Shirakawa, Takahiro, Suzuki, Satowa, Shima, Ayaka, Yamashita, Akifumi, Sekizuka, Tsuyoshi, Kato, Kengo, Kuroda, Makoto, Koike, Ryoji, Kijima, Mayumi
הוצא לאור ב Antimicrob Agents Chemother (2016)

Molecular Evolution of the VP1 Gene in Human Norovirus GII.4 Variants in 1974–2015

מאת Motoya, Takumi, Nagasawa, Koo, Matsushima, Yuki, Nagata, Noriko, Ryo, Akihide, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kuroda, Makoto, Morita, Yukio, Suzuki, Yoshiyuki, Sasaki, Nobuya, Katayama, Kazuhiko, Kimura, Hirokazu
הוצא לאור ב Front Microbiol (2017)

Whole-genome sequencing-based epidemiological analysis of anti-tuberculosis drug resistance genes in Japan in 2007: Application of the Genome Research for Asian Tuberculosis (GReAT...

מאת Takii, Takemasa, Seki, Kouhei, Wakabayashi, Yasutaka, Morishige, Yuta, Sekizuka, Tsuyoshi, Yamashita, Akifumi, Kato, Kengo, Uchimura, Kazuhiro, Ohkado, Akihiro, Keicho, Naoto, Mitarai, Satoshi, Kuroda, Makoto, Kato, Seiya
הוצא לאור ב Sci Rep (2019)