LOMETS: A local meta-threading-server for protein structure prediction

gan Wu, Sitao, Zhang, Yang
Cyhoeddwyd 2007

ANGLOR: A Composite Machine-Learning Algorithm for Protein Backbone Torsion Angle Prediction

gan Wu, Sitao, Zhang, Yang
Cyhoeddwyd 2008

A comprehensive assessment of sequence-based and template-based methods for protein contact prediction

gan Wu, Sitao, Zhang, Yang
Cyhoeddwyd 2008

MUSTER: Improving protein sequence profile–profile alignments by using multiple sources of structure information

gan Wu, Sitao, Zhang, Yang
Cyhoeddwyd 2008

Recognizing Protein Substructure Similarity Using Segmental Threading

gan Wu, Sitao, Zhang, Yang
Cyhoeddwyd 2010

Ab initio modeling of small proteins by iterative TASSER simulations

gan Wu, Sitao, Skolnick, Jeffrey, Zhang, Yang
Cyhoeddwyd 2007

Improving protein structure prediction using multiple sequence-based contact predictions

gan Wu, Sitao, Szilagyi, Andras, Zhang, Yang
Cyhoeddwyd 2011

FR-HIT, a very fast program to recruit metagenomic reads to homologous reference genomes

gan Niu, Beifang, Zhu, Zhengwei, Fu, Limin, Wu, Sitao, Li, Weizhong
Cyhoeddwyd 2011

WebMGA: a customizable web server for fast metagenomic sequence analysis

gan Wu, Sitao, Zhu, Zhengwei, Fu, Liming, Niu, Beifang, Li, Weizhong
Cyhoeddwyd 2011

Transcriptome Characterization by RNA-seq Unravels the Mechanisms of Butyrate-Induced Epigenomic Regulation in Bovine Cells

gan Wu, Sitao, Li, Robert W., Li, Weizhong, Li, Cong-jun
Cyhoeddwyd 2012

CD-HIT: accelerated for clustering the next-generation sequencing data

gan Fu, Limin, Niu, Beifang, Zhu, Zhengwei, Wu, Sitao, Li, Weizhong
Cyhoeddwyd 2012

Ultrafast clustering algorithms for metagenomic sequence analysis

gan Li, Weizhong, Fu, Limin, Niu, Beifang, Wu, Sitao, Wooley, John
Cyhoeddwyd 2012

Alternative Splicing Regulated by Butyrate in Bovine Epithelial Cells

gan Wu, Sitao, Li, Congjun, Huang, Wen, Li, Weizhong, Li, Robert W.
Cyhoeddwyd 2012

Metagenome Plasticity of the Bovine Abomasal Microbiota in Immune Animals in Response to Ostertagia Ostertagi Infection

gan Li, Robert W., Wu, Sitao, Li, Weizhong, Huang, Ying, Gasbarre, Louis C.
Cyhoeddwyd 2011

Perturbation Dynamics of the Rumen Microbiota in Response to Exogenous Butyrate

gan Li, Robert W., Wu, Sitao, Baldwin, Ransom L., Li, Weizhong, Li, Congjun
Cyhoeddwyd 2012

MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data

gan Zhu, Zhengwei, Niu, Beifang, Chen, Jing, Wu, Sitao, Sun, Shulei, Li, Weizhong
Cyhoeddwyd 2013

Worm Burden-Dependent Disruption of the Porcine Colon Microbiota by Trichuris suis Infection

gan Wu, Sitao, Li, Robert W., Li, Weizhong, Beshah, Ethiopia, Dawson, Harry D., Urban, Joseph F.
Cyhoeddwyd 2012

Quantification of Transcriptome Responses of the Rumen Epithelium to Butyrate Infusion using RNA-seq Technology

gan Baldwin, Ransom L., Wu, Sitao, Li, Weizhong, Li, Congjun, Bequette, Brian J., Li, Robert W.
Cyhoeddwyd 2012

Metagenomic Insights into the RDX-Degrading Potential of the Ovine Rumen Microbiome

gan Li, Robert W., Giarrizzo, Juan Gabriel, Wu, Sitao, Li, Weizhong, Duringer, Jennifer M., Craig, A. Morrie
Cyhoeddwyd yn PLoS One (2014)

Transcriptomic Sequencing Reveals a Set of Unique Genes Activated by Butyrate-Induced Histone Modification

gan Li, Cong-Jun, Li, Robert W., Baldwin, Ransom L., Blomberg, Le Ann, Wu, Sitao, Li, Weizhong
Cyhoeddwyd yn Gene Regul Syst Bio (2016)