A Metagenomic Approach to Cyanobacterial Genomics

Por Alvarenga, Danillo O., Fiore, Marli F., Varani, Alessandro M.
Publicado no Front Microbiol (2017)

ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes

Por Varani, Alessandro M, Siguier, Patricia, Gourbeyre, Edith, Charneau, Vincent, Chandler, Mick
Publicado em 2011

Metagenomic analysis of soil and freshwater from zoo agricultural area with organic fertilization

Por Meneghine, Aylan K., Nielsen, Shaun, Varani, Alessandro M., Thomas, Torsten, Carareto Alves, Lucia Maria
Publicado no PLoS One (2017)

Mechanisms of Evolution in High-Consequence Drug Resistance Plasmids

Por He, Susu, Chandler, Michael, Varani, Alessandro M., Hickman, Alison B., Dekker, John P., Dyda, Fred
Publicado no mBio (2016)

Insertion Sequence IS26 Reorganizes Plasmids in Clinically Isolated Multidrug-Resistant Bacteria by Replicative Transposition

Por He, Susu, Hickman, Alison Burgess, Varani, Alessandro M., Siguier, Patricia, Chandler, Michael, Dekker, John P., Dyda, Fred
Publicado no mBio (2015)

Draft Genome Sequence of a Novel Culturable Marine Chroococcalean Cyanobacterium from the South Atlantic Ocean

Por Rigonato, Janaina, Alvarenga, Danillo O., Branco, Luis H. Z., Varani, Alessandro M., Brandini, Frederico P., Fiore, Marli F.
Publicado no Genome Announc (2015)

Comparative genomic analysis of Genlisea (corkscrew plants—Lentibulariaceae) chloroplast genomes reveals an increasing loss of the ndh genes

Por Silva, Saura R., Michael, Todd P., Meer, Elliott J., Pinheiro, Daniel G., Varani, Alessandro M., Miranda, Vitor F. O.
Publicado no PLoS One (2018)

Draft Genome Sequence of Bacillus thuringiensis var. thuringiensis Strain T01-328, a Brazilian Isolate That Produces a Soluble Pesticide Protein, Cry1Ia

Por Varani, Alessandro M., Lemos, Manoel V. F., Fernandes, Camila C., Lemos, Eliana G. M., Alves, Eliane C. C., Desidério, Janete A.
Publicado em 2013

Genomic and Genotypic Characterization of Cylindrospermopsis raciborskii: Toward an Intraspecific Phylogenetic Evaluation by Comparative Genomics

Por Abreu, Vinicius A. C., Popin, Rafael V., Alvarenga, Danillo O., Schaker, Patricia D. C., Hoff-Risseti, Caroline, Varani, Alessandro M., Fiore, Marli F.
Publicado no Front Microbiol (2018)

Corrigendum: Genomic and Genotypic Characterization of Cylindrospermopsis raciborskii: Toward an Intraspecific Phylogenetic Evaluation by Comparative Genomics

Por Abreu, Vinicius A. C., Popin, Rafael V., Alvarenga, Danillo O., Schaker, Patricia D. C., Hoff-Risseti, Caroline, Varani, Alessandro M., Fiore, Marli F.
Publicado no Front Microbiol (2018)

The Chloroplast Genome of Utricularia reniformis Sheds Light on the Evolution of the ndh Gene Complex of Terrestrial Carnivorous Plants from the Lentibulariaceae Family

Por Silva, Saura R., Diaz, Yani C. A., Penha, Helen Alves, Pinheiro, Daniel G., Fernandes, Camila C., Miranda, Vitor F. O., Michael, Todd P., Varani, Alessandro M.
Publicado no PLoS One (2016)

Unravelling potential virulence factor candidates in Xanthomonas citri. subsp. citri by secretome analysis

Por Ferreira, Rafael M., Moreira, Leandro M., Ferro, Jesus A., Soares, Marcia R.R., Laia, Marcelo L., Varani, Alessandro M., de Oliveira, Julio C.F., Ferro, Maria Ines T.
Publicado no PeerJ (2016)

A TALE of Transposition: Tn3-Like Transposons Play a Major Role in the Spread of Pathogenicity Determinants of Xanthomonas citri and Other Xanthomonads

Por Ferreira, Rafael Marini, de Oliveira, Amanda Carolina P., Moreira, Leandro M., Belasque, José, Gourbeyre, Edith, Siguier, Patricia, Ferro, Maria Inês T., Ferro, Jesus A., Chandler, Michael, Varani, Alessandro M.
Publicado no mBio (2015)

The mitochondrial genome of the terrestrial carnivorous plant Utricularia reniformis (Lentibulariaceae): Structure, comparative analysis and evolutionary landmarks

Por Silva, Saura R., Alvarenga, Danillo O., Aranguren, Yani, Penha, Helen A., Fernandes, Camila C., Pinheiro, Daniel G., Oliveira, Marcos T., Michael, Todd P., Miranda, Vitor F. O., Varani, Alessandro M.
Publicado no PLoS One (2017)

Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains

Por Varani, Alessandro M., Monteiro-Vitorello, Claudia B., de Almeida, Luiz G.P., Souza, Rangel C., Cunha, Oberdan L., Lima, Wanessa C., Civerolo, Edwin, Van Sluys, Marie-Anne, Vasconcelos, Ana T.R.
Publicado em 2012

Draft Genome Sequence of the Brazilian Toxic Bloom-Forming Cyanobacterium Microcystis aeruginosa Strain SPC777

Por Fiore, Marli F., Alvarenga, Danillo O., Varani, Alessandro M., Hoff-Risseti, Caroline, Crespim, Elaine, Ramos, Rommel T. J., Silva, Artur, Schaker, Patricia D. C., Heck, Karina, Rigonato, Janaina, Schneider, Maria Paula C.
Publicado em 2013

The Chloroplast Genome of Passiflora edulis (Passifloraceae) Assembled from Long Sequence Reads: Structural Organization and Phylogenomic Studies in Malpighiales

Por Cauz-Santos, Luiz A., Munhoz, Carla F., Rodde, Nathalie, Cauet, Stephane, Santos, Anselmo A., Penha, Helen A., Dornelas, Marcelo C., Varani, Alessandro M., Oliveira, Giancarlo C. X., Bergès, Hélène, Vieira, Maria Lucia C.
Publicado no Front Plant Sci (2017)

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Gallinarum Biovar Pullorum Strain FCAV198, a Brazilian Chicken Pathogen

Por Batista, Diego F. A., Freitas Neto, Oliveiro C., Leite, Laura R., Varani, Alessandro M., Araujo, Flavio M. G., Salim, Anna, Almeida, Adriana M., Ribeiro, Simone A. M., Oliveira, Guilherme C., Barrow, Paul A., Berchieri Junior, Angelo
Publicado em 2014