A Computational Framework for Pattern Detection on Unaligned Sequences: An Application on SARS-CoV-2 Data

od Pechlivanis, Nikolaos, Togkousidis, Anastasios, Tsagiopoulou, Maria, Sgardelis, Stefanos, Kappas, Ilias, Psomopoulos, Fotis
Wydane w Front Genet (2021)

MeinteR: A framework to prioritize DNA methylation aberrations based on conformational and cis-regulatory element enrichment

od Malousi, Andigoni, Kouidou, Sofia, Tsagiopoulou, Maria, Papakonstantinou, Nikos, Bouras, Emmanouil, Georgiou, Elisavet, Tzimagiorgis, Georgios, Stamatopoulos, Kostas
Wydane w Sci Rep (2019)

UMIc: A Preprocessing Method for UMI Deduplication and Reads Correction

od Tsagiopoulou, Maria, Maniou, Maria Christina, Pechlivanis, Nikolaos, Togkousidis, Anastasis, Kotrová, Michaela, Hutzenlaub, Tobias, Kappas, Ilias, Chatzidimitriou, Anastasia, Psomopoulos, Fotis
Wydane w Front Genet (2021)

The Calcitriol/Vitamin D Receptor System Regulates Key Immune Signaling Pathways in Chronic Lymphocytic Leukemia

od Gerousi, Marina, Psomopoulos, Fotis, Kotta, Konstantia, Tsagiopoulou, Maria, Stavroyianni, Niki, Anagnostopoulos, Achilles, Anastasiadis, Athanasios, Gkanidou, Maria, Kotsianidis, Ioannis, Ntoufa, Stavroula, Stamatopoulos, Kostas
Wydane w Cancers (Basel) (2021)

Chronic lymphocytic leukemias with trisomy 12 show a distinct DNA methylation profile linked to altered chromatin activation

od Tsagiopoulou, Maria, Chapaprieta, Vicente, Duran-Ferrer, Martí, Moysiadi, Theodoros, Psomopoulos, Fotis, Kollia, Panagoula, Papakonstantinou, Nikos, Campo, Elias, Stamatopoulos, Kiostas, Martin-Subero, Jose I.
Wydane w Haematologica (2020)

Nuclear inclusions of pathogenic ataxin-1 induce oxidative stress and perturb the protein synthesis machinery

od Laidou, Stamatia, Alanis-Lobato, Gregorio, Pribyl, Jan, Raskó, Tamás, Tichy, Boris, Mikulasek, Kamil, Tsagiopoulou, Maria, Oppelt, Jan, Kastrinaki, Georgia, Lefaki, Maria, Singh, Manvendra, Zink, Annika, Chondrogianni, Niki, Psomopoulos, Fotis, Prigione, Alessandro, Ivics, Zoltán, Pospisilova, Sarka, Skladal, Petr, Izsvák, Zsuzsanna, Andrade-Navarro, Miguel A., Petrakis, Spyros
Wydane w Redox Biol (2020)

DNA methylation profiles in chronic lymphocytic leukemia patients treated with chemoimmunotherapy

od Tsagiopoulou, Maria, Papakonstantinou, Nikos, Moysiadis, Theodoros, Mansouri, Larry, Ljungström, Viktor, Duran-Ferrer, Martí, Malousi, Andigoni, Queirós, Ana C., Plevova, Karla, Bhoi, Sujata, Kollia, Panagoula, Oscier, David, Anagnostopoulos, Achilles, Trentin, Livio, Ritgen, Matthias, Pospisilova, Sarka, Stavroyianni, Niki, Ghia, Paolo, Martin-Subero, Jose I., Pott, Christiane, Rosenquist, Richard, Stamatopoulos, Kostas
Wydane w Clin Epigenetics (2019)