A Comprehensive Multidimensional-Embedded, One-Dimensional Reaction Coordinate for Protein Unfolding/Folding

od Toofanny, Rudesh D., Jonsson, Amanda L., Daggett, Valerie
Wydane 2010

Shared unfolding pathways of unrelated immunoglobulin-like β-sandwich proteins

od Toofanny, Rudesh D, Calhoun, Sara, Jonsson, Amanda L, Daggett, Valerie
Wydane w Protein Eng Des Sel (2019)

Implementation of 3D spatial indexing and compression in a large-scale molecular dynamics simulation database for rapid atomic contact detection

od Toofanny, Rudesh D, Simms, Andrew M, Beck, David AC, Daggett, Valerie
Wydane 2011

Evolutionary drivers of protein shape

od Shannon, Gareth, Marples, Callum R., Toofanny, Rudesh D., Williams, Philip M.
Wydane w Sci Rep (2019)

DIVE: a data intensive visualization engine

od Bromley, Dennis, Rysavy, Steven J., Su, Robert, Toofanny, Rudesh D., Schmidlin, Tom, Daggett, Valerie
Wydane 2014

GB1 Is Not a Two-State Folder: Identification and Characterization of an On-Pathway Intermediate

od Morrone, Angela, Giri, Rajanish, Toofanny, Rudesh D., Travaglini-Allocatelli, Carlo, Brunori, Maurizio, Daggett, Valerie, Gianni, Stefano
Wydane 2011

Dynameomics: A comprehensive database of protein dynamics

od van der Kamp, Marc W., Schaeffer, Richard D., Jonsson, Amanda L., Scouras, Alexander D., Simms, Andrew, Toofanny, Rudesh D., Benson, Noah C., Anderson, Peter C., Merkley, Eric D., Rysavy, Steve, Bromley, Denny, Beck, David A. C., Daggett, Valerie
Wydane 2010