In silico immunology

by Flower, Darren., Timmis, Jon.
Published 2007.

Generic, scalable and decentralized fault detection for robot swarms

by Tarapore, Danesh, Christensen, Anders Lyhne, Timmis, Jon
Published in PLoS One (2017)

Modelling biological behaviours with the unified modelling language: an immunological case study and critique

by Read, Mark, Andrews, Paul S., Timmis, Jon, Kumar, Vipin
Published in J R Soc Interface (2014)

Statistical Techniques Complement UML When Developing Domain Models of Complex Dynamical Biosystems

by Williams, Richard A., Timmis, Jon, Qwarnstrom, Eva E.
Published in PLoS One (2016)

A Petri Net Model of Granulomatous Inflammation: Implications for IL-10 Mediated Control of Leishmania donovani Infection

by Albergante, Luca, Timmis, Jon, Beattie, Lynette, Kaye, Paul M.
Published 2013

Leukocyte Motility Models Assessed through Simulation and Multi-objective Optimization-Based Model Selection

by Read, Mark N., Bailey, Jacqueline, Timmis, Jon, Chtanova, Tatyana
Published in PLoS Comput Biol (2016)

The Need for Combining Implicit and Explicit Communication in Cooperative Robotic Systems

by Gildert, Naomi, Millard, Alan G., Pomfret, Andrew, Timmis, Jon
Published in Front Robot AI (2018)

Automated multi-objective calibration of biological agent-based simulations

by Read, Mark N., Alden, Kieran, Rose, Louis M., Timmis, Jon
Published in J R Soc Interface (2016)

Adaptive Online Fault Diagnosis in Autonomous Robot Swarms

by O'Keeffe, James, Tarapore, Danesh, Millard, Alan G., Timmis, Jon
Published in Front Robot AI (2018)

Utilising a simulation platform to understand the effect of domain model assumptions

by Alden, Kieran, Andrews, Paul S., Veiga-Fernandes, Henrique, Timmis, Jon, Coles, Mark
Published in Nat Comput (2014)

Pairing experimentation and computational modeling to understand the role of tissue inducer cells in the development of lymphoid organs

by Alden, Kieran, Timmis, Jon, Andrews, Paul S., Veiga-Fernandes, Henrique, Coles, Mark C.
Published 2012

Model-Driven Experimentation: A New Approach to Understand Mechanisms of Tertiary Lymphoid Tissue Formation, Function, and Therapeutic Resolution

by Butler, James A., Cosgrove, Jason, Alden, Kieran, Timmis, Jon, Coles, Mark Christopher
Published in Front Immunol (2017)

Spartan: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems

by Alden, Kieran, Read, Mark, Timmis, Jon, Andrews, Paul S., Veiga-Fernandes, Henrique, Coles, Mark
Published 2013

In silico investigation into dendritic cell regulation of CD8Treg mediated killing of Th1 cells in murine experimental autoimmune encephalomyelitis

by Williams, Richard A, Greaves, Richard, Read, Mark, Timmis, Jon, Andrews, Paul S, Kumar, Vipin
Published 2013

Correction: Spartan: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems

by Alden, Kieran, Read, Mark, Timmis, Jon, Andrews, Paul S., Veiga-Fernandes, Henrique, Coles, Mark
Published 2013

Suppression of AGO2 by miR-132 as a determinant of miRNA-mediated silencing in human primary endothelial cells

by Leonov, German, Shah, Kunal, Yee, Daniel, Timmis, Jon, Sharp, Tyson V., Lagos, Dimitris
Published in Int J Biochem Cell Biol (2015)

Functional complexity of the Leishmania granuloma and the potential of in silico modeling

by Moore, John W. J., Moyo, Daniel, Beattie, Lynette, Andrews, Paul S., Timmis, Jon, Kaye, Paul M.
Published 2013

Using argument notation to engineer biological simulations with increased confidence

by Alden, Kieran, Andrews, Paul S., Polack, Fiona A. C., Veiga-Fernandes, Henrique, Coles, Mark C., Timmis, Jon
Published in J R Soc Interface (2015)

ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behaviour

by Evans, Stephanie, Alden, Kieran, Cucurull-Sanchez, Lourdes, Larminie, Christopher, Coles, Mark C., Kullberg, Marika C., Timmis, Jon
Published in PLoS Comput Biol (2017)

Livestock Disease Management for Trading Across Different Regulatory Regimes

by Bate, Andrew M., Jones, Glyn, Kleczkowski, Adam, Naylor, Rebecca, Timmis, Jon, White, Piran C. L., Touza, Julia
Published in Ecohealth (2018)