Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks

Autor Dubitzky Werner, Mandel Johannes J, Swain Martin T
Vydáno 2010-09-01

Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks

Autor Swain, Martin T, Mandel, Johannes J, Dubitzky, Werner
Vydáno 2010

G-Anchor: a novel approach for whole-genome comparative mapping utilizing evolutionary conserved DNA sequences

Autor Lenis, Vasileios Panagiotis E, Swain, Martin, Larkin, Denis M
Vydáno v Gigascience (2018)

Correlation between bacterial G+C content, genome size and the G+C content of associated plasmids and bacteriophages

Autor Almpanis, Apostolos, Swain, Martin, Gatherer, Derek, McEwan, Neil
Vydáno v Microb Genom (2018)

Direct Sequencing of Cryptosporidium in Stool Samples for Public Health

Autor Morris, Arthur, Robinson, Guy, Swain, Martin T., Chalmers, Rachel M.
Vydáno v Front Public Health (2019)

Identification and temporal expression of putative circadian clock transcripts in the amphipod crustacean Talitrus saltator

Autor O’Grady, Joseph F., Hoelters, Laura S., Swain, Martin T., Wilcockson, David C.
Vydáno v PeerJ (2016)

Transcriptional changes when Myxococcus xanthus preys on Escherichia coli suggest myxobacterial predators are constitutively toxic but regulate their feeding

Autor Livingstone, Paul G., Millard, Andrew D., Swain, Martin T., Whitworth, David E.
Vydáno v Microb Genom (2018)

Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida’s Gastrointestinal Tract Microbiome

Autor Dudek, Magda, Adams, Jessica, Swain, Martin, Hegarty, Matthew, Huws, Sharon, Gallagher, Joe
Vydáno v Int J Mol Sci (2014)

Genome-wide prediction of prokaryotic two-component system networks using a sequence-based meta-predictor

Autor Kara, Altan, Vickers, Martin, Swain, Martin, Whitworth, David E., Fernandez-Fuentes, Narcis
Vydáno v BMC Bioinformatics (2015)

Genome Sequencing and Comparative Transcriptomics Provide a Holistic View of 4-Nitrophenol Degradation and Concurrent Fatty Acid Catabolism by Rhodococcus sp. Strain BUPNP1

Autor Sengupta, Kriti, Swain, Martin T., Livingstone, Paul G., Whitworth, David E., Saha, Pradipta
Vydáno v Front Microbiol (2019)

Genome-Wide Identification of Myxobacterial Predation Genes and Demonstration of Formaldehyde Secretion as a Potentially Predation-Resistant Trait of Pseudomonas aeruginosa

Autor Sutton, Daryn, Livingstone, Paul G., Furness, Eleanor, Swain, Martin T., Whitworth, David E.
Vydáno v Front Microbiol (2019)

DISMISS: detection of stranded methylation in MeDIP-Seq data

Autor Niazi, Umar, Geyer, Kathrin K., Vickers, Martin J., Hoffmann, Karl F., Swain, Martin T.
Vydáno v BMC Bioinformatics (2016)

Transcriptomic analysis of crustacean neuropeptide signaling during the moult cycle in the green shore crab, Carcinus maenas

Autor Oliphant, Andrew, Alexander, Jodi L., Swain, Martin T., Webster, Simon G., Wilcockson, David C.
Vydáno v BMC Genomics (2018)

Mendel’s pea crosses: varieties, traits and statistics

Autor Ellis, T. H. Noel, Hofer, Julie M. I., Swain, Martin T., van Dijk, Peter J.
Vydáno v Hereditas (2019)

Restriction and Recruitment—Gene Duplication and the Origin and Evolution of Snake Venom Toxins

Autor Hargreaves, Adam D., Swain, Martin T., Hegarty, Matthew J., Logan, Darren W., Mulley, John F.
Vydáno v Genome Biol Evol (2014)

Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function

Autor Mulley, John F, Hargreaves, Adam D, Hegarty, Matthew J, Heller, R Scott, Swain, Martin T
Vydáno v BMC Genomics (2014)

A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

Autor Swain, Martin T., Tsai, Isheng J., Assefa, Samual A., Newbold, Chris, Berriman, Matthew, Otto, Thomas D.
Vydáno 2012

Genotyping and Whole-Genome Resequencing of Welsh Sheep Breeds Reveal Candidate Genes and Variants for Adaptation to Local Environment and Socioeconomic Traits

Autor Sweet-Jones, James, Lenis, Vasileios Panagiotis, Yurchenko, Andrey A., Yudin, Nikolay S., Swain, Martin, Larkin, Denis M.
Vydáno v Front Genet (2021)

Schistosoma comparative genomics: integrating genome structure, parasite biology and anthelmintic discovery

Autor Swain, Martin T., Larkin, Denis M., Caffrey, Conor R., Davies, Stephen J., Loukas, Alex, Skelly, Patrick J., Hoffmann, Karl F.
Vydáno 2011

De-novo transcriptome assembly for gene identification, analysis, annotation, and molecular marker discovery in Onobrychis viciifolia

Autor Mora-Ortiz, Marina, Swain, Martin T., Vickers, Martin J., Hegarty, Matthew J., Kelly, Rhys, Smith, Lydia M. J., Skøt, Leif
Vydáno v BMC Genomics (2016)