A Population Genomics Perspective on the Emergence and Adaptation of New Plant Pathogens in Agro-Ecosystems

Por Stukenbrock, Eva H., Bataillon, Thomas
Publicado em 2012

Fine-Scale Recombination Maps of Fungal Plant Pathogens Reveal Dynamic Recombination Landscapes and Intragenic Hotspots

Por Stukenbrock, Eva H., Dutheil, Julien Y.
Publicado no Genetics (2018)

RNA-seq-Based Gene Annotation and Comparative Genomics of Four Fungal Grass Pathogens in the Genus Zymoseptoria Identify Novel Orphan Genes and Species-Specific Invasions of Transp...

Por Grandaubert, Jonathan, Bhattacharyya, Amitava, Stukenbrock, Eva H.
Publicado no G3 (Bethesda) (2015)

Rapid emergence of pathogens in agro-ecosystems: global threats to agricultural sustainability and food security

Por McDonald, Bruce A., Stukenbrock, Eva H.
Publicado no Philos Trans R Soc Lond B Biol Sci (2016)

MafFilter: a highly flexible and extensible multiple genome alignment files processor

Por Dutheil, Julien Y, Gaillard, Sylvain, Stukenbrock, Eva H
Publicado em 2014

The genomic determinants of adaptive evolution in a fungal pathogen

Por Grandaubert, Jonathan, Dutheil, Julien Y., Stukenbrock, Eva H.
Publicado no Evol Lett (2019)

Extraordinary Genome Instability and Widespread Chromosome Rearrangements During Vegetative Growth

Por Möller, Mareike, Habig, Michael, Freitag, Michael, Stukenbrock, Eva H.
Publicado no Genetics (2018)

Interspecific Gene Exchange Introduces High Genetic Variability in Crop Pathogen

Por Feurtey, Alice, Stevens, Danielle M, Stephan, Wolfgang, Stukenbrock, Eva H
Publicado no Genome Biol Evol (2019)

On Variant Discovery in Genomes of Fungal Plant Pathogens

Por Potgieter, Lizel, Feurtey, Alice, Dutheil, Julien Y., Stukenbrock, Eva H.
Publicado no Front Microbiol (2020)

Expression Profiling of the Wheat Pathogen Zymoseptoria tritici Reveals Genomic Patterns of Transcription and Host-Specific Regulatory Programs

Por Kellner, Ronny, Bhattacharyya, Amitava, Poppe, Stephan, Hsu, Tiffany Y., Brem, Rachel B., Stukenbrock, Eva H.
Publicado em 2014

Coevolution and Life Cycle Specialization of Plant Cell Wall Degrading Enzymes in a Hemibiotrophic Pathogen

Por Brunner, Patrick C., Torriani, Stefano F.F., Croll, Daniel, Stukenbrock, Eva H., McDonald, Bruce A.
Publicado em 2013

Highly flexible infection programs in a specialized wheat pathogen

Por Haueisen, Janine, Möller, Mareike, Eschenbrenner, Christoph J., Grandaubert, Jonathan, Seybold, Heike, Adamiak, Holger, Stukenbrock, Eva H.
Publicado no Ecol Evol (2018)

Whole-Genome and Chromosome Evolution Associated with Host Adaptation and Speciation of the Wheat Pathogen Mycosphaerella graminicola

Por Stukenbrock, Eva H., Jørgensen, Frank G., Zala, Marcello, Hansen, Troels T., McDonald, Bruce A., Schierup, Mikkel H.
Publicado em 2010

Chromatin analyses of Zymoseptoria tritici: methods for chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq)

Por Soyer, Jessica L., Möller, Mareike, Schotanus, Klaas, Connolly, Lanelle R., Galazka, Jonathan M., Freitag, Michael, Stukenbrock, Eva H.
Publicado no Fungal Genet Biol (2015)

Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States

Por Richards, Jonathan K., Stukenbrock, Eva H., Carpenter, Jessica, Liu, Zhaohui, Cowger, Christina, Faris, Justin D., Friesen, Timothy L.
Publicado no PLoS Genet (2019)

Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes

Por Schotanus, Klaas, Soyer, Jessica L., Connolly, Lanelle R., Grandaubert, Jonathan, Happel, Petra, Smith, Kristina M., Freitag, Michael, Stukenbrock, Eva H.
Publicado no Epigenetics Chromatin (2015)

Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria

Por Feurtey, Alice, Lorrain, Cécile, Croll, Daniel, Eschenbrenner, Christoph, Freitag, Michael, Habig, Michael, Haueisen, Janine, Möller, Mareike, Schotanus, Klaas, Stukenbrock, Eva H.
Publicado no BMC Genomics (2020)

The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species

Por Stukenbrock, Eva H., Bataillon, Thomas, Dutheil, Julien Y., Hansen, Troels T., Li, Ruiqiang, Zala, Marcello, McDonald, Bruce A., Wang, Jun, Schierup, Mikkel H.
Publicado em 2011

Cercospora beticola: The intoxicating lifestyle of the leaf spot pathogen of sugar beet

Por Rangel, Lorena I., Spanner, Rebecca E., Ebert, Malaika K., Pethybridge, Sarah J., Stukenbrock, Eva H., de Jonge, Ronnie, Secor, Gary A., Bolton, Melvin D.
Publicado no Mol Plant Pathol (2020)

A fungal pathogen induces systemic susceptibility and systemic shifts in wheat metabolome and microbiome composition

Por Seybold, Heike, Demetrowitsch, Tobias J., Hassani, M. Amine, Szymczak, Silke, Reim, Ekaterina, Haueisen, Janine, Lübbers, Luisa, Rühlemann, Malte, Franke, Andre, Schwarz, Karin, Stukenbrock, Eva H.
Publicado no Nat Commun (2020)