genozip: a fast and efficient compression tool for VCF files

ανά Lan, Divon, Tobler, Raymond, Souilmi, Yassine, Llamas, Bastien
Τόπος έκδοσης Bioinformatics (2020)

Highlights of the first ISCB Student Council Symposium in Africa 2015

ανά Souilmi, Yassine, Allali, Imane, Badad, Oussama, Dwibedi, Chinmay Kumar
Τόπος έκδοσης F1000Res (2015)

Ancient DNA Studies in Pre-Columbian Mesoamerica

ανά Roca-Rada, Xavier, Souilmi, Yassine, Teixeira, João C., Llamas, Bastien
Τόπος έκδοσης Genes (Basel) (2020)

MC-GenomeKey: a multicloud system for the detection and annotation of genomic variants

ανά Elshazly, Hatem, Souilmi, Yassine, Tonellato, Peter J., Wall, Dennis P., Abouelhoda, Mohamed
Τόπος έκδοσης BMC Bioinformatics (2017)

COSMOS: cloud enabled NGS analysis

ανά Souilmi, Yassine, Jung, Jae-Yoon, Lancaster, Alex, Gafni, Erik, Amzazi, Saaid, Ghazal, Hassan, Wall, Dennis, Tonellato, Peter
Τόπος έκδοσης BMC Bioinformatics (2015)

COSMOS: Python library for massively parallel workflows

ανά Gafni, Erik, Luquette, Lovelace J., Lancaster, Alex K., Hawkins, Jared B., Jung, Jae-Yoon, Souilmi, Yassine, Wall, Dennis P., Tonellato, Peter J.
Έκδοση 2014

Scalable and cost-effective NGS genotyping in the cloud

ανά Souilmi, Yassine, Lancaster, Alex K., Jung, Jae-Yoon, Rizzo, Ettore, Hawkins, Jared B., Powles, Ryan, Amzazi, Saaïd, Ghazal, Hassan, Tonellato, Peter J., Wall, Dennis P.
Τόπος έκδοσης BMC Med Genomics (2015)

An ancient viral epidemic involving host coronavirus interacting genes more than 20,000 years ago in East Asia

ανά Souilmi, Yassine, Lauterbur, M. Elise, Tobler, Ray, Huber, Christian D., Johar, Angad S., Moradi, Shayli Varasteh, Johnston, Wayne A., Krogan, Nevan J., Alexandrov, Kirill, Enard, David
Τόπος έκδοσης Curr Biol (2021)

Ancient mitochondrial genomes from the Argentinian Pampas inform the early peopling of the Southern Cone of South America

ανά Roca-Rada, Xavier, Politis, Gustavo, Messineo, Pablo G., Scheifler, Nahuel, Scabuzzo, Clara, González, Mariela, Harkins, Kelly M., Reich, David, Souilmi, Yassine, Teixeira, João C., Llamas, Bastien, Fehren-Schmitz, Lars
Τόπος έκδοσης iScience (2021)

Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience

ανά Ahmed, Azza E., Mpangase, Phelelani T., Panji, Sumir, Baichoo, Shakuntala, Souilmi, Yassine, Fadlelmola, Faisal M., Alghali, Mustafa, Aron, Shaun, Bendou, Hocine, De Beste, Eugene, Mbiyavanga, Mamana, Souiai, Oussema, Yi, Long, Zermeno, Jennie, Armstrong, Don, O'Connor, Brian D., Mainzer, Liudmila Sergeevna, Crusoe, Michael R., Meintjes, Ayton, Van Heusden, Peter, Botha, Gerrit, Joubert, Fourie, Jongeneel, C. Victor, Hazelhurst, Scott, Mulder, Nicola
Τόπος έκδοσης AAS Open Res (2019)

Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics

ανά Baichoo, Shakuntala, Souilmi, Yassine, Panji, Sumir, Botha, Gerrit, Meintjes, Ayton, Hazelhurst, Scott, Bendou, Hocine, Beste, Eugene de, Mpangase, Phelelani T., Souiai, Oussema, Alghali, Mustafa, Yi, Long, O’Connor, Brian D., Crusoe, Michael, Armstrong, Don, Aron, Shaun, Joubert, Fourie, Ahmed, Azza E., Mbiyavanga, Mamana, Heusden, Peter van, Magosi, Lerato E., Zermeno, Jennie, Mainzer, Liudmila Sergeevna, Fadlelmola, Faisal M., Jongeneel, C. Victor, Mulder, Nicola
Τόπος έκδοσης BMC Bioinformatics (2018)

Equitable Expanded Carrier Screening Needs Indigenous Clinical and Population Genomic Data

ανά Easteal, Simon, Arkell, Ruth M., Balboa, Renzo F., Bellingham, Shayne A., Brown, Alex D., Calma, Tom, Cook, Matthew C., Davis, Megan, Dawkins, Hugh J.S., Dinger, Marcel E., Dobbie, Michael S., Farlow, Ashley, Gwynne, Kylie G., Hermes, Azure, Hoy, Wendy E., Jenkins, Misty R., Jiang, Simon H., Kaplan, Warren, Leslie, Stephen, Llamas, Bastien, Mann, Graham J., McMorran, Brendan J., McWhirter, Rebekah E., Meldrum, Cliff J., Nagaraj, Shivashankar H., Newman, Saul J., Nunn, Jack S., Ormond-Parker, Lyndon, Orr, Neil J., Paliwal, Devashi, Patel, Hardip R., Pearson, Glenn, Pratt, Greg R., Rambaldini, Boe, Russell, Lynette W., Savarirayan, Ravi, Silcocks, Matthew, Skinner, John C., Souilmi, Yassine, Vinuesa, Carola G., Baynam, Gareth
Τόπος έκδοσης Am J Hum Genet (2020)