genozip: a fast and efficient compression tool for VCF files

Por Lan, Divon, Tobler, Raymond, Souilmi, Yassine, Llamas, Bastien
Publicado no Bioinformatics (2020)

Highlights of the first ISCB Student Council Symposium in Africa 2015

Por Souilmi, Yassine, Allali, Imane, Badad, Oussama, Dwibedi, Chinmay Kumar
Publicado no F1000Res (2015)

Ancient DNA Studies in Pre-Columbian Mesoamerica

Por Roca-Rada, Xavier, Souilmi, Yassine, Teixeira, João C., Llamas, Bastien
Publicado no Genes (Basel) (2020)

MC-GenomeKey: a multicloud system for the detection and annotation of genomic variants

Por Elshazly, Hatem, Souilmi, Yassine, Tonellato, Peter J., Wall, Dennis P., Abouelhoda, Mohamed
Publicado no BMC Bioinformatics (2017)

COSMOS: cloud enabled NGS analysis

Por Souilmi, Yassine, Jung, Jae-Yoon, Lancaster, Alex, Gafni, Erik, Amzazi, Saaid, Ghazal, Hassan, Wall, Dennis, Tonellato, Peter
Publicado no BMC Bioinformatics (2015)

COSMOS: Python library for massively parallel workflows

Por Gafni, Erik, Luquette, Lovelace J., Lancaster, Alex K., Hawkins, Jared B., Jung, Jae-Yoon, Souilmi, Yassine, Wall, Dennis P., Tonellato, Peter J.
Publicado em 2014

Scalable and cost-effective NGS genotyping in the cloud

Por Souilmi, Yassine, Lancaster, Alex K., Jung, Jae-Yoon, Rizzo, Ettore, Hawkins, Jared B., Powles, Ryan, Amzazi, Saaïd, Ghazal, Hassan, Tonellato, Peter J., Wall, Dennis P.
Publicado no BMC Med Genomics (2015)

Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience

Por Ahmed, Azza E., Mpangase, Phelelani T., Panji, Sumir, Baichoo, Shakuntala, Souilmi, Yassine, Fadlelmola, Faisal M., Alghali, Mustafa, Aron, Shaun, Bendou, Hocine, De Beste, Eugene, Mbiyavanga, Mamana, Souiai, Oussema, Yi, Long, Zermeno, Jennie, Armstrong, Don, O'Connor, Brian D., Mainzer, Liudmila Sergeevna, Crusoe, Michael R., Meintjes, Ayton, Van Heusden, Peter, Botha, Gerrit, Joubert, Fourie, Jongeneel, C. Victor, Hazelhurst, Scott, Mulder, Nicola
Publicado no AAS Open Res (2019)

Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics

Por Baichoo, Shakuntala, Souilmi, Yassine, Panji, Sumir, Botha, Gerrit, Meintjes, Ayton, Hazelhurst, Scott, Bendou, Hocine, Beste, Eugene de, Mpangase, Phelelani T., Souiai, Oussema, Alghali, Mustafa, Yi, Long, O’Connor, Brian D., Crusoe, Michael, Armstrong, Don, Aron, Shaun, Joubert, Fourie, Ahmed, Azza E., Mbiyavanga, Mamana, Heusden, Peter van, Magosi, Lerato E., Zermeno, Jennie, Mainzer, Liudmila Sergeevna, Fadlelmola, Faisal M., Jongeneel, C. Victor, Mulder, Nicola
Publicado no BMC Bioinformatics (2018)

Equitable Expanded Carrier Screening Needs Indigenous Clinical and Population Genomic Data

Por Easteal, Simon, Arkell, Ruth M., Balboa, Renzo F., Bellingham, Shayne A., Brown, Alex D., Calma, Tom, Cook, Matthew C., Davis, Megan, Dawkins, Hugh J.S., Dinger, Marcel E., Dobbie, Michael S., Farlow, Ashley, Gwynne, Kylie G., Hermes, Azure, Hoy, Wendy E., Jenkins, Misty R., Jiang, Simon H., Kaplan, Warren, Leslie, Stephen, Llamas, Bastien, Mann, Graham J., McMorran, Brendan J., McWhirter, Rebekah E., Meldrum, Cliff J., Nagaraj, Shivashankar H., Newman, Saul J., Nunn, Jack S., Ormond-Parker, Lyndon, Orr, Neil J., Paliwal, Devashi, Patel, Hardip R., Pearson, Glenn, Pratt, Greg R., Rambaldini, Boe, Russell, Lynette W., Savarirayan, Ravi, Silcocks, Matthew, Skinner, John C., Souilmi, Yassine, Vinuesa, Carola G., Baynam, Gareth
Publicado no Am J Hum Genet (2020)