Lambda: the local aligner for massive biological data

le Hauswedell, Hannes, Singer, Jochen, Reinert, Knut
Foilsithe 2014

Single-cell mutation identification via phylogenetic inference

le Singer, Jochen, Kuipers, Jack, Jahn, Katharina, Beerenwinkel, Niko
Foilsithe in Nat Commun (2018)

Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callers

le Hofmann, Ariane L., Behr, Jonas, Singer, Jochen, Kuipers, Jack, Beisel, Christian, Schraml, Peter, Moch, Holger, Beerenwinkel, Niko
Foilsithe in BMC Bioinformatics (2017)

The Digital Bee Brain: Integrating and Managing Neurons in a Common 3D Reference System

le Rybak, Jürgen, Kuß, Anja, Lamecker, Hans, Zachow, Stefan, Hege, Hans-Christian, Lienhard, Matthias, Singer, Jochen, Neubert, Kerstin, Menzel, Randolf
Foilsithe 2010

Bioinformatics for precision oncology

le Singer, Jochen, Irmisch, Anja, Ruscheweyh, Hans-Joachim, Singer, Franziska, Toussaint, Nora C, Levesque, Mitchell P, Stekhoven, Daniel J, Beerenwinkel, Niko
Foilsithe in Brief Bioinform (2017)

Spatial Distribution of Private Gene Mutations in Clear Cell Renal Cell Carcinoma

le Moore, Ariane L., Batavia, Aashil A., Kuipers, Jack, Singer, Jochen, Burcklen, Elodie, Schraml, Peter, Beisel, Christian, Moch, Holger, Beerenwinkel, Niko
Foilsithe in Cancers (Basel) (2021)

SwissMTB: establishing comprehensive molecular cancer diagnostics in Swiss clinics

le Singer, Franziska, Irmisch, Anja, Toussaint, Nora C., Grob, Linda, Singer, Jochen, Thurnherr, Thomas, Beerenwinkel, Niko, Levesque, Mitchell P., Dummer, Reinhard, Quagliata, Luca, Rothschild, Sacha I., Wicki, Andreas, Beisel, Christian, Stekhoven, Daniel J.
Foilsithe in BMC Med Inform Decis Mak (2018)

NGS-pipe: a flexible, easily extendable and highly configurable framework for NGS analysis

le Singer, Jochen, Ruscheweyh, Hans-Joachim, Hofmann, Ariane L, Thurnherr, Thomas, Singer, Franziska, Toussaint, Nora C, Ng, Charlotte K Y, Piscuoglio, Salvatore, Beisel, Christian, Christofori, Gerhard, Dummer, Reinhard, Hall, Michael N, Krek, Wilhelm, Levesque, Mitchell P, Manz, Markus G, Moch, Holger, Papassotiropoulos, Andreas, Stekhoven, Daniel J, Wild, Peter, Wüst, Thomas, Rinn, Bernd, Beerenwinkel, Niko
Foilsithe in Bioinformatics (2018)