Deep-sea vent ε-proteobacterial genomes provide insights into emergence of pathogens

Por Nakagawa, Satoshi, Takaki, Yoshihiro, Shimamura, Shigeru, Reysenbach, Anna-Louise, Takai, Ken, Horikoshi, Koki
Publicado em 2007

Loss of genes for DNA recombination and repair in the reductive genome evolution of thioautotrophic symbionts of Calyptogena clams

Por Kuwahara, Hirokazu, Takaki, Yoshihiro, Shimamura, Shigeru, Yoshida, Takao, Maeda, Taro, Kunieda, Takekazu, Maruyama, Tadashi
Publicado em 2011

Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus

Por Takami, Hideto, Takaki, Yoshihiro, Chee, Gab-Joo, Nishi, Shinro, Shimamura, Shigeru, Suzuki, Hiroko, Matsui, Satomi, Uchiyama, Ikuo
Publicado em 2004

Physiological and Genomic Features of a Novel Sulfur-Oxidizing Gammaproteobacterium Belonging to a Previously Uncultivated Symbiotic Lineage Isolated from a Hydrothermal Vent

Por Nunoura, Takuro, Takaki, Yoshihiro, Kazama, Hiromi, Kakuta, Jungo, Shimamura, Shigeru, Makita, Hiroko, Hirai, Miho, Miyazaki, Masayuki, Takai, Ken
Publicado em 2014

Formation of Core-Shell Nanoparticles Composed of Magnetite and Samarium Oxide in Magnetospirillum magneticum Strain RSS-1

Por Shimoshige, Hirokazu, Nakajima, Yoshikata, Kobayashi, Hideki, Yanagisawa, Keiichi, Nagaoka, Yutaka, Shimamura, Shigeru, Mizuki, Toru, Inoue, Akira, Maekawa, Toru
Publicado no PLoS One (2017)

Ancient Occasional Host Switching of Maternally Transmitted Bacterial Symbionts of Chemosynthetic Vesicomyid Clams

Por Ozawa, Genki, Shimamura, Shigeru, Takaki, Yoshihiro, Takishita, Kiyotaka, Ikuta, Tetsuro, Barry, James P., Maruyama, Tadashi, Fujikura, Katsunori, Yoshida, Takao
Publicado no Genome Biol Evol (2017)

Hadal biosphere: Insight into the microbial ecosystem in the deepest ocean on Earth

Por Nunoura, Takuro, Takaki, Yoshihiro, Hirai, Miho, Shimamura, Shigeru, Makabe, Akiko, Koide, Osamu, Kikuchi, Tohru, Miyazaki, Junichi, Koba, Keisuke, Yoshida, Naohiro, Sunamura, Michinari, Takai, Ken
Publicado no Proc Natl Acad Sci U S A (2015)

Microbial Diversity in Sediments from the Bottom of the Challenger Deep, the Mariana Trench

Por Nunoura, Takuro, Nishizawa, Manabu, Hirai, Miho, Shimamura, Shigeru, Harnvoravongchai, Phurt, Koide, Osamu, Morono, Yuki, Fukui, Toshiaki, Inagaki, Fumio, Miyazaki, Junichi, Takaki, Yoshihiro, Takai, Ken
Publicado no Microbes Environ (2018)

Bacterial Lifestyle in a Deep-sea Hydrothermal Vent Chimney Revealed by the Genome Sequence of the Thermophilic Bacterium Deferribacter desulfuricans SSM1

Por Takaki, Yoshihiro, Shimamura, Shigeru, Nakagawa, Satoshi, Fukuhara, Yasuo, Horikawa, Hiroshi, Ankai, Akiho, Harada, Takeshi, Hosoyama, Akira, Oguchi, Akio, Fukui, Shigehiro, Fujita, Nobuyuki, Takami, Hideto, Takai, Ken
Publicado em 2010

Algivore or Phototroph? Plakobranchus ocellatus (Gastropoda) Continuously Acquires Kleptoplasts and Nutrition from Multiple Algal Species in Nature

Por Maeda, Taro, Hirose, Euichi, Chikaraishi, Yoshito, Kawato, Masaru, Takishita, Kiyotaka, Yoshida, Takao, Verbruggen, Heroen, Tanaka, Jiro, Shimamura, Shigeru, Takaki, Yoshihiro, Tsuchiya, Masashi, Iwai, Kenji, Maruyama, Tadashi
Publicado em 2012

Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams

Por Shimamura, Shigeru, Kaneko, Takashi, Ozawa, Genki, Matsumoto, Mamiko Nishino, Koshiishi, Takeru, Takaki, Yoshihiro, Kato, Chiaki, Takai, Ken, Yoshida, Takao, Fujikura, Katsunori, Barry, James P., Maruyama, Tadashi
Publicado no PLoS One (2017)

Correction: Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams

Por Shimamura, Shigeru, Kaneko, Takashi, Ozawa, Genki, Matsumoto, Mamiko Nishino, Koshiishi, Takeru, Takaki, Yoshihiro, Kato, Chiaki, Takai, Ken, Yoshida, Takao, Fujikura, Katsunori, Barry, James P., Maruyama, Tadashi
Publicado no PLoS One (2017)

Genome Sequence of a Mesophilic Hydrogenotrophic Methanogen Methanocella paludicola, the First Cultivated Representative of the Order Methanocellales

Por Sakai, Sanae, Takaki, Yoshihiro, Shimamura, Shigeru, Sekine, Mitsuo, Tajima, Takahisa, Kosugi, Hiroki, Ichikawa, Natsuko, Tasumi, Eiji, Hiraki, Aiko T., Shimizu, Ai, Kato, Yumiko, Nishiko, Rika, Mori, Koji, Fujita, Nobuyuki, Imachi, Hiroyuki, Takai, Ken
Publicado em 2011

Heterogeneous composition of key metabolic gene clusters in a vent mussel symbiont population

Por Ikuta, Tetsuro, Takaki, Yoshihiro, Nagai, Yukiko, Shimamura, Shigeru, Tsuda, Miwako, Kawagucci, Shinsuke, Aoki, Yui, Inoue, Koji, Teruya, Morimi, Satou, Kazuhito, Teruya, Kuniko, Shimoji, Makiko, Tamotsu, Hinako, Hirano, Takashi, Maruyama, Tadashi, Yoshida, Takao
Publicado no ISME J (2016)

Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont

Por Nakagawa, Satoshi, Shimamura, Shigeru, Takaki, Yoshihiro, Suzuki, Yohey, Murakami, Shun-ichi, Watanabe, Tamaki, Fujiyoshi, So, Mino, Sayaka, Sawabe, Tomoo, Maeda, Takahiro, Makita, Hiroko, Nemoto, Suguru, Nishimura, Shin-Ichiro, Watanabe, Hiromi, Watsuji, Tomo-o, Takai, Ken
Publicado em 2014