Theoretical analyses on a flipping mechanism of UV-induced DNA damage

av Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
I publikationen Biophys Physicobiol (2016)

The binding structure and affinity of photodamaged duplex DNA with members of the photolyase/cryptochrome family: A computational study

av Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
I publikationen Biophys Physicobiol (2018)

In Silico Structural Modeling and Analysis of Elongation Factor-1 Alpha and Elongation Factor-like Protein

av Sakamoto, Kotaro, Kayanuma, Megumi, Inagaki, Yuji, Hashimoto, Tetsuo, Shigeta, Yasuteru
I publikationen ACS Omega (2019)

Understanding the Detection Mechanisms and Ability of Molecular Hydrogen on Three-Dimensional Bicontinuous Nanoporous Reduced Graphene Oxide

av Ito, Yoshikazu, Kayanuma, Megumi, Shigeta, Yasuteru, Fujita, Jun-ichi, Tanabe, Yoichi
I publikationen Materials (Basel) (2020)

Interaction of 8-anilinonaphthalene-1-sulfonate with SARS-CoV-2 main protease and its application as a fluorescent probe for inhibitor identification

av Deetanya, Peerapon, Hengphasatporn, Kowit, Wilasluck, Patcharin, Shigeta, Yasuteru, Rungrotmongkol, Thanyada, Wangkanont, Kittikhun
I publikationen Comput Struct Biotechnol J (2021)

pyProGA—A PyMOL plugin for protein residue network analysis

av Sladek, Vladimir, Yamamoto, Yuta, Harada, Ryuhei, Shoji, Mitsuo, Shigeta, Yasuteru, Sladek, Vladimir
I publikationen PLoS One (2021)

Novel Techniques for Observing Structural Dynamics of Photoresponsive Liquid Crystals

av Hada, Masaki, Saito, Shohei, Sato, Ryuma, Miyata, Kiyoshi, Hayashi, Yasuhiko, Shigeta, Yasuteru, Onda, Ken
I publikationen J Vis Exp (2018)

Computational Analysis Reveals a Critical Point Mutation in the N-Terminal Region of the Signaling Lymphocytic Activation Molecule Responsible for the Cross-Species Infection with...

av Yamamoto, Yuta, Nakano, Shogo, Seki, Fumio, Shigeta, Yasuteru, Ito, Sohei, Tokiwa, Hiroaki, Takeda, Makoto
I publikationen Molecules (2021)

Structural Changes of the Trinuclear Copper Center in Bilirubin Oxidase upon Reduction

av Tokiwa, Takaki, Shoji, Mitsuo, Sladek, Vladimir, Shibata, Naoki, Higuchi, Yoshiki, Kataoka, Kunishige, Sakurai, Takeshi, Shigeta, Yasuteru, Misaizu, Fuminori
I publikationen Molecules (2018)

Target Identification Using Homopharma and Network-Based Methods for Predicting Compounds Against Dengue Virus-Infected Cells

av Hengphasatporn, Kowit, Plaimas, Kitiporn, Suratanee, Apichat, Wongsriphisant, Peemapat, Yang, Jinn-Moon, Shigeta, Yasuteru, Chavasiri, Warinthorn, Boonyasuppayakorn, Siwaporn, Rungrotmongkol, Thanyada
I publikationen Molecules (2020)

New assay method based on Raman spectroscopy for enzymes reacting with gaseous substrates

av Kawahara‐Nakagawa, Yuka, Nishikawa, Koji, Nakashima, Satoru, Inoue, Shota, Ohta, Takehiro, Ogura, Takashi, Shigeta, Yasuteru, Fukutani, Katsuyuki, Yagi, Tatsuhiko, Higuchi, Yoshiki
I publikationen Protein Sci (2019)

Ion-pairing π-electronic systems: ordered arrangement and noncovalent interactions of negatively charged porphyrins

av Sasano, Yoshifumi, Tanaka, Hiroki, Haketa, Yohei, Kobayashi, Yoichi, Ishibashi, Yukihide, Morimoto, Tatsuki, Sato, Ryuma, Shigeta, Yasuteru, Yasuda, Nobuhiro, Asahi, Tsuyoshi, Maeda, Hiromitsu
I publikationen Chem Sci (2021)

Coulomb and CH–π interactions in (6–4) photolyase–DNA complex dominate DNA binding and repair abilities

av Terai, Yuma, Sato, Ryuma, Yumiba, Takahiro, Harada, Ryuhei, Shimizu, Kohei, Toga, Tatsuya, Ishikawa-Fujiwara, Tomoko, Todo, Takeshi, Iwai, Shigenori, Shigeta, Yasuteru, Yamamoto, Junpei
I publikationen Nucleic Acids Res (2018)

Accessing the Accuracy of Density Functional Theory through Structure and Dynamics of the Water–Air Interface

av Ohto, Tatsuhiko, Dodia, Mayank, Xu, Jianhang, Imoto, Sho, Tang, Fujie, Zysk, Frederik, Kühne, Thomas D., Shigeta, Yasuteru, Bonn, Mischa, Wu, Xifan, Nagata, Yuki
I publikationen J Phys Chem Lett (2019)

Molecular mechanisms of substrate specificities of uridinecytidine kinase

av Tanaka, Wataru, Shoji, Mitsuo, Tomoike, Fumiaki, Ujiie, Yuzuru, Hanaoka, Kyohei, Harada, Ryuhei, Kayanuma, Megumi, Kamiya, Katsumasa, Ishida, Toyokazu, Masui, Ryoji, Kuramitsu, Seiki, Shigeta, Yasuteru
I publikationen Biophys Physicobiol (2016)

Dibromopinocembrin and Dibromopinostrobin Are Potential Anti-Dengue Leads with Mild Animal Toxicity

av Boonyasuppayakorn, Siwaporn, Saelee, Thanaphon, Visitchanakun, Peerapat, Leelahavanichkul, Asada, Hengphasatporn, Kowit, Shigeta, Yasuteru, Huynh, Thao Nguyen Thanh, Chu, Justin Jang Hann, Rungrotmongkol, Thanyada, Chavasiri, Warinthorn
I publikationen Molecules (2020)

Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing

av Murakawa, Takeshi, Kurihara, Kazuo, Shoji, Mitsuo, Shibazaki, Chie, Sunami, Tomoko, Tamada, Taro, Yano, Naomine, Yamada, Taro, Kusaka, Katsuhiro, Suzuki, Mamoru, Shigeta, Yasuteru, Kuroki, Ryota, Hayashi, Hideyuki, Yano, Takato, Tanizawa, Katsuyuki, Adachi, Motoyasu, Okajima, Toshihide
I publikationen Proc Natl Acad Sci U S A (2020)