Theoretical analyses on a flipping mechanism of UV-induced DNA damage

le Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
Foilsithe in Biophys Physicobiol (2016)

The binding structure and affinity of photodamaged duplex DNA with members of the photolyase/cryptochrome family: A computational study

le Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
Foilsithe in Biophys Physicobiol (2018)

In Silico Structural Modeling and Analysis of Elongation Factor-1 Alpha and Elongation Factor-like Protein

le Sakamoto, Kotaro, Kayanuma, Megumi, Inagaki, Yuji, Hashimoto, Tetsuo, Shigeta, Yasuteru
Foilsithe in ACS Omega (2019)

Understanding the Detection Mechanisms and Ability of Molecular Hydrogen on Three-Dimensional Bicontinuous Nanoporous Reduced Graphene Oxide

le Ito, Yoshikazu, Kayanuma, Megumi, Shigeta, Yasuteru, Fujita, Jun-ichi, Tanabe, Yoichi
Foilsithe in Materials (Basel) (2020)

Interaction of 8-anilinonaphthalene-1-sulfonate with SARS-CoV-2 main protease and its application as a fluorescent probe for inhibitor identification

le Deetanya, Peerapon, Hengphasatporn, Kowit, Wilasluck, Patcharin, Shigeta, Yasuteru, Rungrotmongkol, Thanyada, Wangkanont, Kittikhun
Foilsithe in Comput Struct Biotechnol J (2021)

pyProGA—A PyMOL plugin for protein residue network analysis

le Sladek, Vladimir, Yamamoto, Yuta, Harada, Ryuhei, Shoji, Mitsuo, Shigeta, Yasuteru, Sladek, Vladimir
Foilsithe in PLoS One (2021)

Novel Techniques for Observing Structural Dynamics of Photoresponsive Liquid Crystals

le Hada, Masaki, Saito, Shohei, Sato, Ryuma, Miyata, Kiyoshi, Hayashi, Yasuhiko, Shigeta, Yasuteru, Onda, Ken
Foilsithe in J Vis Exp (2018)

Computational Analysis Reveals a Critical Point Mutation in the N-Terminal Region of the Signaling Lymphocytic Activation Molecule Responsible for the Cross-Species Infection with...

le Yamamoto, Yuta, Nakano, Shogo, Seki, Fumio, Shigeta, Yasuteru, Ito, Sohei, Tokiwa, Hiroaki, Takeda, Makoto
Foilsithe in Molecules (2021)

Structural Changes of the Trinuclear Copper Center in Bilirubin Oxidase upon Reduction

le Tokiwa, Takaki, Shoji, Mitsuo, Sladek, Vladimir, Shibata, Naoki, Higuchi, Yoshiki, Kataoka, Kunishige, Sakurai, Takeshi, Shigeta, Yasuteru, Misaizu, Fuminori
Foilsithe in Molecules (2018)

Target Identification Using Homopharma and Network-Based Methods for Predicting Compounds Against Dengue Virus-Infected Cells

le Hengphasatporn, Kowit, Plaimas, Kitiporn, Suratanee, Apichat, Wongsriphisant, Peemapat, Yang, Jinn-Moon, Shigeta, Yasuteru, Chavasiri, Warinthorn, Boonyasuppayakorn, Siwaporn, Rungrotmongkol, Thanyada
Foilsithe in Molecules (2020)

New assay method based on Raman spectroscopy for enzymes reacting with gaseous substrates

le Kawahara‐Nakagawa, Yuka, Nishikawa, Koji, Nakashima, Satoru, Inoue, Shota, Ohta, Takehiro, Ogura, Takashi, Shigeta, Yasuteru, Fukutani, Katsuyuki, Yagi, Tatsuhiko, Higuchi, Yoshiki
Foilsithe in Protein Sci (2019)

Ion-pairing π-electronic systems: ordered arrangement and noncovalent interactions of negatively charged porphyrins

le Sasano, Yoshifumi, Tanaka, Hiroki, Haketa, Yohei, Kobayashi, Yoichi, Ishibashi, Yukihide, Morimoto, Tatsuki, Sato, Ryuma, Shigeta, Yasuteru, Yasuda, Nobuhiro, Asahi, Tsuyoshi, Maeda, Hiromitsu
Foilsithe in Chem Sci (2021)

Coulomb and CH–π interactions in (6–4) photolyase–DNA complex dominate DNA binding and repair abilities

le Terai, Yuma, Sato, Ryuma, Yumiba, Takahiro, Harada, Ryuhei, Shimizu, Kohei, Toga, Tatsuya, Ishikawa-Fujiwara, Tomoko, Todo, Takeshi, Iwai, Shigenori, Shigeta, Yasuteru, Yamamoto, Junpei
Foilsithe in Nucleic Acids Res (2018)

Accessing the Accuracy of Density Functional Theory through Structure and Dynamics of the Water–Air Interface

le Ohto, Tatsuhiko, Dodia, Mayank, Xu, Jianhang, Imoto, Sho, Tang, Fujie, Zysk, Frederik, Kühne, Thomas D., Shigeta, Yasuteru, Bonn, Mischa, Wu, Xifan, Nagata, Yuki
Foilsithe in J Phys Chem Lett (2019)

Molecular mechanisms of substrate specificities of uridinecytidine kinase

le Tanaka, Wataru, Shoji, Mitsuo, Tomoike, Fumiaki, Ujiie, Yuzuru, Hanaoka, Kyohei, Harada, Ryuhei, Kayanuma, Megumi, Kamiya, Katsumasa, Ishida, Toyokazu, Masui, Ryoji, Kuramitsu, Seiki, Shigeta, Yasuteru
Foilsithe in Biophys Physicobiol (2016)

Dibromopinocembrin and Dibromopinostrobin Are Potential Anti-Dengue Leads with Mild Animal Toxicity

le Boonyasuppayakorn, Siwaporn, Saelee, Thanaphon, Visitchanakun, Peerapat, Leelahavanichkul, Asada, Hengphasatporn, Kowit, Shigeta, Yasuteru, Huynh, Thao Nguyen Thanh, Chu, Justin Jang Hann, Rungrotmongkol, Thanyada, Chavasiri, Warinthorn
Foilsithe in Molecules (2020)

Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing

le Murakawa, Takeshi, Kurihara, Kazuo, Shoji, Mitsuo, Shibazaki, Chie, Sunami, Tomoko, Tamada, Taro, Yano, Naomine, Yamada, Taro, Kusaka, Katsuhiro, Suzuki, Mamoru, Shigeta, Yasuteru, Kuroki, Ryota, Hayashi, Hideyuki, Yano, Takato, Tanizawa, Katsuyuki, Adachi, Motoyasu, Okajima, Toshihide
Foilsithe in Proc Natl Acad Sci U S A (2020)