Theoretical analyses on a flipping mechanism of UV-induced DNA damage

von Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
Veröffentlicht in Biophys Physicobiol (2016)

The binding structure and affinity of photodamaged duplex DNA with members of the photolyase/cryptochrome family: A computational study

von Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
Veröffentlicht in Biophys Physicobiol (2018)

In Silico Structural Modeling and Analysis of Elongation Factor-1 Alpha and Elongation Factor-like Protein

von Sakamoto, Kotaro, Kayanuma, Megumi, Inagaki, Yuji, Hashimoto, Tetsuo, Shigeta, Yasuteru
Veröffentlicht in ACS Omega (2019)

Understanding the Detection Mechanisms and Ability of Molecular Hydrogen on Three-Dimensional Bicontinuous Nanoporous Reduced Graphene Oxide

von Ito, Yoshikazu, Kayanuma, Megumi, Shigeta, Yasuteru, Fujita, Jun-ichi, Tanabe, Yoichi
Veröffentlicht in Materials (Basel) (2020)

Interaction of 8-anilinonaphthalene-1-sulfonate with SARS-CoV-2 main protease and its application as a fluorescent probe for inhibitor identification

von Deetanya, Peerapon, Hengphasatporn, Kowit, Wilasluck, Patcharin, Shigeta, Yasuteru, Rungrotmongkol, Thanyada, Wangkanont, Kittikhun
Veröffentlicht in Comput Struct Biotechnol J (2021)

pyProGA—A PyMOL plugin for protein residue network analysis

von Sladek, Vladimir, Yamamoto, Yuta, Harada, Ryuhei, Shoji, Mitsuo, Shigeta, Yasuteru, Sladek, Vladimir
Veröffentlicht in PLoS One (2021)

Novel Techniques for Observing Structural Dynamics of Photoresponsive Liquid Crystals

von Hada, Masaki, Saito, Shohei, Sato, Ryuma, Miyata, Kiyoshi, Hayashi, Yasuhiko, Shigeta, Yasuteru, Onda, Ken
Veröffentlicht in J Vis Exp (2018)

Computational Analysis Reveals a Critical Point Mutation in the N-Terminal Region of the Signaling Lymphocytic Activation Molecule Responsible for the Cross-Species Infection with...

von Yamamoto, Yuta, Nakano, Shogo, Seki, Fumio, Shigeta, Yasuteru, Ito, Sohei, Tokiwa, Hiroaki, Takeda, Makoto
Veröffentlicht in Molecules (2021)

Structural Changes of the Trinuclear Copper Center in Bilirubin Oxidase upon Reduction

von Tokiwa, Takaki, Shoji, Mitsuo, Sladek, Vladimir, Shibata, Naoki, Higuchi, Yoshiki, Kataoka, Kunishige, Sakurai, Takeshi, Shigeta, Yasuteru, Misaizu, Fuminori
Veröffentlicht in Molecules (2018)

Target Identification Using Homopharma and Network-Based Methods for Predicting Compounds Against Dengue Virus-Infected Cells

von Hengphasatporn, Kowit, Plaimas, Kitiporn, Suratanee, Apichat, Wongsriphisant, Peemapat, Yang, Jinn-Moon, Shigeta, Yasuteru, Chavasiri, Warinthorn, Boonyasuppayakorn, Siwaporn, Rungrotmongkol, Thanyada
Veröffentlicht in Molecules (2020)

New assay method based on Raman spectroscopy for enzymes reacting with gaseous substrates

von Kawahara‐Nakagawa, Yuka, Nishikawa, Koji, Nakashima, Satoru, Inoue, Shota, Ohta, Takehiro, Ogura, Takashi, Shigeta, Yasuteru, Fukutani, Katsuyuki, Yagi, Tatsuhiko, Higuchi, Yoshiki
Veröffentlicht in Protein Sci (2019)

Ion-pairing π-electronic systems: ordered arrangement and noncovalent interactions of negatively charged porphyrins

von Sasano, Yoshifumi, Tanaka, Hiroki, Haketa, Yohei, Kobayashi, Yoichi, Ishibashi, Yukihide, Morimoto, Tatsuki, Sato, Ryuma, Shigeta, Yasuteru, Yasuda, Nobuhiro, Asahi, Tsuyoshi, Maeda, Hiromitsu
Veröffentlicht in Chem Sci (2021)

Coulomb and CH–π interactions in (6–4) photolyase–DNA complex dominate DNA binding and repair abilities

von Terai, Yuma, Sato, Ryuma, Yumiba, Takahiro, Harada, Ryuhei, Shimizu, Kohei, Toga, Tatsuya, Ishikawa-Fujiwara, Tomoko, Todo, Takeshi, Iwai, Shigenori, Shigeta, Yasuteru, Yamamoto, Junpei
Veröffentlicht in Nucleic Acids Res (2018)

Accessing the Accuracy of Density Functional Theory through Structure and Dynamics of the Water–Air Interface

von Ohto, Tatsuhiko, Dodia, Mayank, Xu, Jianhang, Imoto, Sho, Tang, Fujie, Zysk, Frederik, Kühne, Thomas D., Shigeta, Yasuteru, Bonn, Mischa, Wu, Xifan, Nagata, Yuki
Veröffentlicht in J Phys Chem Lett (2019)

Molecular mechanisms of substrate specificities of uridinecytidine kinase

von Tanaka, Wataru, Shoji, Mitsuo, Tomoike, Fumiaki, Ujiie, Yuzuru, Hanaoka, Kyohei, Harada, Ryuhei, Kayanuma, Megumi, Kamiya, Katsumasa, Ishida, Toyokazu, Masui, Ryoji, Kuramitsu, Seiki, Shigeta, Yasuteru
Veröffentlicht in Biophys Physicobiol (2016)

Dibromopinocembrin and Dibromopinostrobin Are Potential Anti-Dengue Leads with Mild Animal Toxicity

von Boonyasuppayakorn, Siwaporn, Saelee, Thanaphon, Visitchanakun, Peerapat, Leelahavanichkul, Asada, Hengphasatporn, Kowit, Shigeta, Yasuteru, Huynh, Thao Nguyen Thanh, Chu, Justin Jang Hann, Rungrotmongkol, Thanyada, Chavasiri, Warinthorn
Veröffentlicht in Molecules (2020)

Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing

von Murakawa, Takeshi, Kurihara, Kazuo, Shoji, Mitsuo, Shibazaki, Chie, Sunami, Tomoko, Tamada, Taro, Yano, Naomine, Yamada, Taro, Kusaka, Katsuhiro, Suzuki, Mamoru, Shigeta, Yasuteru, Kuroki, Ryota, Hayashi, Hideyuki, Yano, Takato, Tanizawa, Katsuyuki, Adachi, Motoyasu, Okajima, Toshihide
Veröffentlicht in Proc Natl Acad Sci U S A (2020)