Patent Human Infections with the Whipworm, Trichuris trichiura, Are Not Associated with Alterations in the Faecal Microbiota

od Cooper, Philip, Walker, Alan W., Reyes, Jorge, Chico, Martha, Salter, Susannah J., Vaca, Maritza, Parkhill, Julian
Wydane 2013

Genetic Stabilization of the Drug-Resistant PMEN1 Pneumococcus Lineage by Its Distinctive DpnIII Restriction-Modification System

od Eutsey, Rory A., Powell, Evan, Dordel, Janina, Salter, Susannah J., Clark, Tyson A., Korlach, Jonas, Ehrlich, Garth D., Hiller, N. Luisa
Wydane w mBio (2015)

A longitudinal study of the infant nasopharyngeal microbiota: The effects of age, illness and antibiotic use in a cohort of South East Asian children

od Salter, Susannah J., Turner, Claudia, Watthanaworawit, Wanitda, de Goffau, Marcus C., Wagner, Josef, Parkhill, Julian, Bentley, Stephen D., Goldblatt, David, Nosten, Francois, Turner, Paul
Wydane w PLoS Negl Trop Dis (2017)

Pneumococcal Capsule Synthesis Locus cps as Evolutionary Hotspot with Potential to Generate Novel Serotypes by Recombination

od Mostowy, Rafał J., Croucher, Nicholas J., De Maio, Nicola, Chewapreecha, Claire, Salter, Susannah J., Turner, Paul, Aanensen, David M., Bentley, Stephen D., Didelot, Xavier, Fraser, Christophe
Wydane w Mol Biol Evol (2017)

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

od Salter, Susannah J, Cox, Michael J, Turek, Elena M, Calus, Szymon T, Cookson, William O, Moffatt, Miriam F, Turner, Paul, Parkhill, Julian, Loman, Nicholas J, Walker, Alan W
Wydane w BMC Biol (2014)

'Candidatus Ornithobacterium hominis': insights gained from draft genomes obtained from nasopharyngeal swabs

od Salter, Susannah J., Scott, Paul, Page, Andrew J., Tracey, Alan, de Goffau, Marcus C., Cormie, Claire, Ochoa-Montaño, Bernardo, Ling, Clare L., Tangmanakit, Jiraporn, Turner, Paul, Parkhill, Julian
Wydane w Microb Genom (2019)

Comprehensive Identification of Single Nucleotide Polymorphisms Associated with Beta-lactam Resistance within Pneumococcal Mosaic Genes

od Chewapreecha, Claire, Marttinen, Pekka, Croucher, Nicholas J., Salter, Susannah J., Harris, Simon R., Mather, Alison E., Hanage, William P., Goldblatt, David, Nosten, Francois H., Turner, Claudia, Turner, Paul, Bentley, Stephen D., Parkhill, Julian
Wydane 2014

Freshwater monitoring by nanopore sequencing

od Urban, Lara, Holzer, Andre, Baronas, J Jotautas, Hall, Michael B, Braeuninger-Weimer, Philipp, Scherm, Michael J, Kunz, Daniel J, Perera, Surangi N, Martin-Herranz, Daniel E, Tipper, Edward T, Salter, Susannah J, Stammnitz, Maximilian R
Wydane w eLife (2021)

Dense genomic sampling identifies highways of pneumococcal recombination

od Chewapreecha, Claire, Harris, Simon R, Croucher, Nicholas J, Turner, Claudia, Marttinen, Pekka, Cheng, Lu, Pessia, Alberto, Aanensen, David M, Mather, Alison E, Page, Andrew J, Salter, Susannah J., Harris, David, Nosten, Francois, Goldblatt, David, Corander, Jukka, Parkhill, Julian, Turner, Paul, Bentley, Stephen D
Wydane 2014

Dominant Role of Nucleotide Substitution in the Diversification of Serotype 3 Pneumococci over Decades and during a Single Infection

od Croucher, Nicholas J., Mitchell, Andrea M., Gould, Katherine A., Inverarity, Donald, Barquist, Lars, Feltwell, Theresa, Fookes, Maria C., Harris, Simon R., Dordel, Janina, Salter, Susannah J., Browall, Sarah, Zemlickova, Helena, Parkhill, Julian, Normark, Staffan, Henriques-Normark, Birgitta, Hinds, Jason, Mitchell, Tim J., Bentley, Stephen D.
Wydane 2013

Global Phylogenomic Analysis of Nonencapsulated Streptococcus pneumoniae Reveals a Deep-Branching Classic Lineage That Is Distinct from Multiple Sporadic Lineages

od Hilty, Markus, Wüthrich, Daniel, Salter, Susannah J., Engel, Hansjürg, Campbell, Samuel, Sá-Leão, Raquel, de Lencastre, Hermínia, Hermans, Peter, Sadowy, Ewa, Turner, Paul, Chewapreecha, Claire, Diggle, Mathew, Pluschke, Gerd, McGee, Lesley, Köseoğlu Eser, Özgen, Low, Donald E., Smith-Vaughan, Heidi, Endimiani, Andrea, Küffer, Marianne, Dupasquier, Mélanie, Beaudoing, Emmanuel, Weber, Johann, Bruggmann, Rémy, Hanage, William P., Parkhill, Julian, Hathaway, Lucy J., Mühlemann, Kathrin, Bentley, Stephen D.
Wydane w Genome Biol Evol (2014)