Threshold selection in gene co-expression networks using spectral graph theory techniques

द्वारा Perkins, Andy D, Langston, Michael A
प्रकाशित 2009

Toward a more holistic method of genome assembly assessment

द्वारा Thrash, Adam, Hoffmann, Federico, Perkins, Andy
में प्रकाशित BMC Bioinformatics (2020)

Clustering of High Throughput Gene Expression Data

द्वारा Pirim, Harun, Ekşioğlu, Burak, Perkins, Andy, Yüceer, Çetin
प्रकाशित 2012

Integrating phenotype and gene expression data for predicting gene function

द्वारा Malone, Brandon M, Perkins, Andy D, Bridges, Susan M
प्रकाशित 2009

Using genome-wide associations to identify metabolic pathways involved in maize aflatoxin accumulation resistance

द्वारा Tang, Juliet D., Perkins, Andy, Williams, W. Paul, Warburton, Marilyn L.
में प्रकाशित BMC Genomics (2015)

Proceedings of the 2014 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

द्वारा Wren, Jonathan D, Dozmorov, Mikhail G, Burian, Dennis, Perkins, Andy, Zhang, Chaoyang, Hoyt, Peter, Kaundal, Rakesh
में प्रकाशित BMC Bioinformatics (2014)

Short-Read Sequencing for Genomic Analysis of the Brown Rot Fungus Fibroporia radiculosa

द्वारा Tang, Juliet D., Perkins, Andy D., Sonstegard, Tad S., Schroeder, Steven G., Burgess, Shane C., Diehl, Susan V.
प्रकाशित 2012

Relating significance and relations of differentially expressed genes in response to Aspergillus flavus infection in maize

द्वारा Asters, Matthew C., Williams, W. Paul, Perkins, Andy D., Mylroie, J. Erik, Windham, Gary L., Shan, Xueyan
प्रकाशित 2014

Gene Expression Analysis of Copper Tolerance and Wood Decay in the Brown Rot Fungus Fibroporia radiculosa

द्वारा Tang, Juliet D., Parker, Leslie A., Perkins, Andy D., Sonstegard, Tad S., Schroeder, Steven G., Nicholas, Darrel D., Diehl, Susan V.
प्रकाशित 2013

Proceedings of the 2013 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

द्वारा Wren, Jonathan D, Dozmorov, Mikhail G, Burian, Dennis, Kaundal, Rakesh, Perkins, Andy, Perkins, Ed, Kupfer, Doris M, Springer, Gordon K
प्रकाशित 2013

Comparative genomics of Aeromonas veronii: Identification of a pathotype impacting aquaculture globally

द्वारा Tekedar, Hasan C., Kumru, Salih, Blom, Jochen, Perkins, Andy D., Griffin, Matt J., Abdelhamed, Hossam, Karsi, Attila, Lawrence, Mark L.
में प्रकाशित PLoS One (2019)

A module-based analytical strategy to identify novel disease-associated genes shows an inhibitory role for interleukin 7 Receptor in allergic inflammation

द्वारा Mobini, Reza, Andersson, Bengt A, Erjefält, Jonas, Hahn-Zoric, Mirjana, Langston, Michael A, Perkins, Andy D, Cardell, Lars Olaf, Benson, Mikael
प्रकाशित 2009

Extracting Gene Networks for Low-Dose Radiation Using Graph Theoretical Algorithms

द्वारा Voy, Brynn H, Scharff, Jon A, Perkins, Andy D, Saxton, Arnold M, Borate, Bhavesh, Chesler, Elissa J, Branstetter, Lisa K, Langston, Michael A
प्रकाशित 2006

Dynamics of microRNAs in bull spermatozoa

द्वारा Govindaraju, Aruna, Uzun, Alper, Robertson, LaShonda, Atli, Mehmet O, Kaya, Abdullah, Topper, Einko, Crate, Elizabeth A, Padbury, James, Perkins, Andy, Memili, Erdogan
प्रकाशित 2012

Testis specific histone 2B is associated with sperm chromatin dynamics and bull fertility-a pilot study

द्वारा Kutchy, Naseer A., Velho, Ana, Menezes, Erika S. B., Jacobsen, Marie, Thibaudeau, Giselle, Wills, Robert W., Moura, Arlindo, Kaya, Abdullah, Perkins, Andy, Memili, Erdogan
में प्रकाशित Reprod Biol Endocrinol (2017)

A systematic comparison of genome-scale clustering algorithms

द्वारा Jay, Jeremy J, Eblen, John D, Zhang, Yun, Benson, Mikael, Perkins, Andy D, Saxton, Arnold M, Voy, Brynn H, Chesler, Elissa J, Langston, Michael A
प्रकाशित 2012

Whole blood transcriptomic analysis of beef cattle at arrival identifies potential predictive molecules and mechanisms that indicate animals that naturally resist bovine respirator...

द्वारा Scott, Matthew A., Woolums, Amelia R., Swiderski, Cyprianna E., Perkins, Andy D., Nanduri, Bindu, Smith, David R., Karisch, Brandi B., Epperson, William B., Blanton, John R.
में प्रकाशित PLoS One (2020)

Comprehensive at-arrival transcriptomic analysis of post-weaned beef cattle uncovers type I interferon and antiviral mechanisms associated with bovine respiratory disease mortality

द्वारा Scott, Matthew A., Woolums, Amelia R., Swiderski, Cyprianna E., Perkins, Andy D., Nanduri, Bindu, Smith, David R., Karisch, Brandi B., Epperson, William B., Blanton, John R.
में प्रकाशित PLoS One (2021)

Genome-level analysis of genetic regulation of liver gene expression networks

द्वारा Gatti, Daniel, Maki, Akira, Chesler, Elissa J., Kirova, Roumyana, Kosyk, Oksana, Lu, Lu, Manly, Kenneth F., Qu, Yanhua, Williams, Robert W., Perkins, Andy, Langston, Michael A., Threadgill, David W., Rusyn, Ivan
प्रकाशित 2007

No-boundary thinking in bioinformatics research

द्वारा Huang, Xiuzhen, Bruce, Barry, Buchan, Alison, Congdon, Clare Bates, Cramer, Carole L, Jennings, Steven F, Jiang, Hongmei, Li, Zenglu, McClure, Gail, McMullen, Rick, Moore, Jason H, Nanduri, Bindu, Peckham, Joan, Perkins, Andy, Polson, Shawn W, Rekepalli, Bhanu, Salem, Saeed, Specker, Jennifer, Wunsch, Donald, Xiong, Donghai, Zhang, Shuzhong, Zhao, Zhongming
प्रकाशित 2013