Polarizable Empirical Force Field for Hexopyranose Monosaccharides Based on the Classical Drude Oscillator

Por Patel, Dhilon S., He, Xibing, MacKerell, Alexander D.
Publicado em 2014

Refinement of OprH-LPS Interactions by Molecular Simulations

Por Lee, Joonseong, Patel, Dhilon S., Kucharska, Iga, Tamm, Lukas K., Im, Wonpil
Publicado no Biophys J (2017)

Conformational Properties of α- or β-(1→6)-Linked Oligosaccharides: Hamiltonian Replica Exchange MD Simulations and NMR Experiments

Por Patel, Dhilon S., Pendrill, Robert, Mallajosyula, Sairam S., Widmalm, Göran, MacKerell, Alexander D.
Publicado em 2014

Bilayer Properties of Lipid A from Various Gram-Negative Bacteria

Por Kim, Seonghoon, Patel, Dhilon S., Park, Soohyung, Slusky, Joanna, Klauda, Jeffery B., Widmalm, Göran, Im, Wonpil
Publicado no Biophys J (2016)

Glycan Reader is improved to recognize most sugar types and chemical modifications in the Protein Data Bank

Por Park, Sang-Jun, Lee, Jumin, Patel, Dhilon S, Ma, Hongjing, Lee, Hui Sun, Jo, Sunhwan, Im, Wonpil
Publicado no Bioinformatics (2017)

Influence of Ganglioside GM1 Concentration on Lipid Clustering and Membrane Properties and Curvature

Por Patel, Dhilon S., Park, Soohyung, Wu, Emilia L., Yeom, Min Sun, Widmalm, Göran, Klauda, Jeffery B., Im, Wonpil
Publicado no Biophys J (2016)

Dynamics and Interactions of OmpF and LPS: Influence on Pore Accessibility and Ion Permeability

Por Patel, Dhilon S., Re, Suyong, Wu, Emilia L., Qi, Yifei, Klebba, Phillip E., Widmalm, Göran, Yeom, Min Sun, Sugita, Yuji, Im, Wonpil
Publicado no Biophys J (2016)

BamA POTRA Domain Interacts with a Native Lipid Membrane Surface

Por Fleming, Patrick J., Patel, Dhilon S., Wu, Emilia L., Qi, Yifei, Yeom, Min Sun, Sousa, Marcelo Carlos, Fleming, Karen G., Im, Wonpil
Publicado no Biophys J (2016)

CHARMM-GUI Martini Maker for Modeling and Simulation of Complex Bacterial Membranes with Lipopolysaccharides

Por Hsu, Pin-Chia, Bruininks, Bart M. H., Jefferies, Damien, de Souza, Paulo Cesar Telles, Lee, Jumin, Patel, Dhilon S., Marrink, Siewert J., Qi, Yifei, Khalid, Syma, Im, Wonpil
Publicado no J Comput Chem (2017)

CHARMM-GUI 10 Years for Biomolecular Modeling and Simulation

Por Jo, Sunhwan, Cheng, Xi, Lee, Jumin, Kim, Seonghoon, Park, Sang-Jun, Patel, Dhilon S., Beaven, Andrew H., Lee, Kyu Il, Rui, Huan, Roux, Benoît, MacKerell, Alexander D., Klauda, Jeffrey B., Qi, Yifei, Im, Wonpil
Publicado no J Comput Chem (2016)