Molecular Dynamics/Order Parameter eXtrapolation (MD/OPX) for Bionanosystem Simulations

Por Miao, Yinglong, Ortoleva, Peter J.
Publicado em 2009

Nanosystem Self-Assembly Pathways Discovered via All-Atom Multiscale Analysis

Por Pankavich, Stephen D., Ortoleva, Peter J.
Publicado em 2012

Variational methods for time-dependent classical many-particle systems

Por Sereda, Yuriy V., Ortoleva, Peter J.
Publicado em 2013

Multiscale Factorization Method for Simulating Mesoscopic Systems with Atomic Precision

Por Abi Mansour, Andrew, Ortoleva, Peter J.
Publicado em 2014

Hierarchical Order Parameters for Macromolecular Assembly Simulations I: Construction and Dynamical Properties of Order Parameters

Por Singharoy, Abhishek, Sereda, Yuriy, Ortoleva, Peter J.
Publicado em 2012

Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and information theory

Por Sayyed-Ahmad, Abdallah, Tuncay, Kagan, Ortoleva, Peter J
Publicado em 2007

All-atom Multiscale Simulation of Cowpea Chlorotic Mottle Virus Capsid Swelling

Por Miao, Yinglong, Johnson, John E., Ortoleva, Peter J.
Publicado em 2010

Space Warping Order Parameters and Symmetry: Application to Multiscale Simulation of Macromolecular Assemblies

Por Singharoy, Abhishek, Joshi, Harshad, Miao, Yinglong, Ortoleva, Peter J.
Publicado no J Phys Chem B (2012)

Discovering Free Energy Basins for Macromolecular Systems via Guided Multiscale Simulation

Por Sereda, Yuriy V., Singharoy, Abhishek B., Jarrold, Martin F., Ortoleva, Peter J.
Publicado em 2012

Multiscale Simulation of Microbe Structure and Dynamics

Por Joshi, Harshad, Singharoy, Abhishek, Sereda, Yuriy V., Cheluvaraja, Srinath C., Ortoleva, Peter J.
Publicado em 2011