Elucidating Syntrophic Butyrate-Degrading Populations in Anaerobic Digesters Using Stable-Isotope-Informed Genome-Resolved Metagenomics

מאת Ziels, Ryan M., Nobu, Masaru K., Sousa, Diana Z.
הוצא לאור ב mSystems (2019)

Metagenomic and Metatranscriptomic Analyses Revealed Uncultured Bacteroidales Populations as the Dominant Proteolytic Amino Acid Degraders in Anaerobic Digesters

מאת Mei, Ran, Nobu, Masaru K., Narihiro, Takashi, Liu, Wen-Tso
הוצא לאור ב Front Microbiol (2020)

Draft Genome Sequence of Syntrophomonas wolfei subsp. methylbutyratica Strain 4J5(T) (JCM 14075), a Mesophilic Butyrate- and 2-Methylbutyrate-Degrading Syntroph

מאת Narihiro, Takashi, Nobu, Masaru K., Tamaki, Hideyuki, Kamagata, Yoichi, Liu, Wen-Tso
הוצא לאור ב Genome Announc (2016)

Evaluating digestion efficiency in full-scale anaerobic digesters by identifying active microbial populations through the lens of microbial activity

מאת Mei, Ran, Narihiro, Takashi, Nobu, Masaru K., Kuroda, Kyohei, Liu, Wen-Tso
הוצא לאור ב Sci Rep (2016)

Microbial Community Analysis of Anaerobic Reactors Treating Soft Drink Wastewater

מאת Narihiro, Takashi, Kim, Na-Kyung, Mei, Ran, Nobu, Masaru K., Liu, Wen-Tso
הוצא לאור ב PLoS One (2015)

Comparative Genomics of Syntrophic Branched-Chain Fatty Acid Degrading Bacteria

מאת Narihiro, Takashi, Nobu, Masaru K., Tamaki, Hideyuki, Kamagata, Yoichi, Sekiguchi, Yuji, Liu, Wen-Tso
הוצא לאור ב Microbes Environ (2016)

Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor

מאת Nobu, Masaru K, Narihiro, Takashi, Rinke, Christian, Kamagata, Yoichi, Tringe, Susannah G, Woyke, Tanja, Liu, Wen-Tso
הוצא לאור ב ISME J (2015)

A Single-Granule-Level Approach Reveals Ecological Heterogeneity in an Upflow Anaerobic Sludge Blanket Reactor

מאת Kuroda, Kyohei, Nobu, Masaru K., Mei, Ran, Narihiro, Takashi, Bocher, Benjamin T. W., Yamaguchi, Takashi, Liu, Wen-Tso
הוצא לאור ב PLoS One (2016)

Draft Genome Sequence of Moorella sp. Strain Hama-1, a Novel Acetogenic Bacterium Isolated from a Thermophilic Digestion Reactor

מאת Harada, Jun, Yamada, Takeshi, Giri, Surya, Hamada, Masako, Nobu, Masaru K., Narihiro, Takashi, Tsuji, Hideto, Daimon, Hiroyuki
הוצא לאור ב Genome Announc (2018)

Isolation of a member of the candidate phylum ‘Atribacteria’ reveals a unique cell membrane structure

מאת Katayama, Taiki, Nobu, Masaru K., Kusada, Hiroyuki, Meng, Xian-Ying, Hosogi, Naoki, Uematsu, Katsuyuki, Yoshioka, Hideyoshi, Kamagata, Yoichi, Tamaki, Hideyuki
הוצא לאור ב Nat Commun (2020)

Catabolism and interactions of uncultured organisms shaped by eco-thermodynamics in methanogenic bioprocesses

מאת Nobu, Masaru K., Narihiro, Takashi, Mei, Ran, Kamagata, Yoichi, Lee, Patrick K. H., Lee, Po-Heng, McInerney, Michael J., Liu, Wen-Tso
הוצא לאור ב Microbiome (2020)

Draft Genome Sequence of Syntrophorhabdus aromaticivorans Strain UI, a Mesophilic Aromatic Compound-Degrading Syntroph

מאת Nobu, Masaru K., Narihiro, Takashi, Tamaki, Hideyuki, Qiu, Yan-Ling, Sekiguchi, Yuji, Woyke, Tanja, Goodwin, Lynne, Davenport, Karen W., Kamagata, Yoichi, Liu, Wen-Tso
יצא לאור 2014

Using DNA-based stable isotope probing to reveal novel propionate- and acetate-oxidizing bacteria in propionate-fed mesophilic anaerobic chemostats

מאת Wang, Hui-Zhong, Lv, Xiao-Meng, Yi, Yue, Zheng, Dan, Gou, Min, Nie, Yong, Hu, Bing, Nobu, Masaru K., Narihiro, Takashi, Tang, Yue-Qin
הוצא לאור ב Sci Rep (2019)

Complete Genome Sequence of the Intracellular Bacterial Symbiont TC1 in the Anaerobic Ciliate Trimyema compressum

מאת Shinzato, Naoya, Aoyama, Hiroaki, Saitoh, Seikoh, Nikoh, Naruo, Nakano, Kazuma, Shimoji, Makiko, Shinzato, Misuzu, Satou, Kazuhito, Teruya, Kuniko, Hirano, Takashi, Yamada, Takanori, Nobu, Masaru K., Tamaki, Hideyuki, Shirai, Yumi, Park, Sanghwa, Narihiro, Takashi, Liu, Wen-Tso, Kamagata, Yoichi
הוצא לאור ב Genome Announc (2016)

Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients

מאת Hawley, Alyse K., Nobu, Masaru K., Wright, Jody J., Durno, W. Evan, Morgan-Lang, Connor, Sage, Brent, Schwientek, Patrick, Swan, Brandon K., Rinke, Christian, Torres-Beltrán, Monica, Mewis, Keith, Liu, Wen-Tso, Stepanauskas, Ramunas, Woyke, Tanja, Hallam, Steven J.
הוצא לאור ב Nat Commun (2017)

Phylogeny and physiology of candidate phylum ‘Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics

מאת Nobu, Masaru K, Dodsworth, Jeremy A, Murugapiran, Senthil K, Rinke, Christian, Gies, Esther A, Webster, Gordon, Schwientek, Patrick, Kille, Peter, Parkes, R John, Sass, Henrik, Jørgensen, Bo B, Weightman, Andrew J, Liu, Wen-Tso, Hallam, Steven J, Tsiamis, George, Woyke, Tanja, Hedlund, Brian P
הוצא לאור ב ISME J (2016)

Isolation of an archaeon at the prokaryote–eukaryote interface

מאת Imachi, Hiroyuki, Nobu, Masaru K., Nakahara, Nozomi, Morono, Yuki, Ogawara, Miyuki, Takaki, Yoshihiro, Takano, Yoshinori, Uematsu, Katsuyuki, Ikuta, Tetsuro, Ito, Motoo, Matsui, Yohei, Miyazaki, Masayuki, Murata, Kazuyoshi, Saito, Yumi, Sakai, Sanae, Song, Chihong, Tasumi, Eiji, Yamanaka, Yuko, Yamaguchi, Takashi, Kamagata, Yoichi, Tamaki, Hideyuki, Takai, Ken
הוצא לאור ב Nature (2020)