A Boolean-based systems biology approach to predict novel genes associated with cancer: Application to colorectal cancer

Por Nagaraj, Shivashankar H, Reverter, Antonio
Publicado em 2011

The interplay between evolution, regulation and tissue specificity in the Human Hereditary Diseasome

Por Nagaraj, Shivashankar H, Ingham, Aaron, Reverter, Antonio
Publicado em 2010

Needles in the EST Haystack: Large-Scale Identification and Analysis of Excretory-Secretory (ES) Proteins in Parasitic Nematodes Using Expressed Sequence Tags (ESTs)

Por Nagaraj, Shivashankar H., Gasser, Robin B., Ranganathan, Shoba
Publicado em 2008

ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform

Por Nagaraj, Shivashankar H., Deshpande, Nandan, Gasser, Robin B., Ranganathan, Shoba
Publicado em 2007

<it>In silico </it>analysis of expressed sequence tags from <it>Trichostrongylus vitrinus </it>(Nematoda): comparison of the automated ESTExplorer workflow platform with convention...

Por Nisbet Alasdair J, Gasser Robin B, Nagaraj Shivashankar H, Ranganathan Shoba
Publicado em 2008-02-01

In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database search...

Por Nagaraj, Shivashankar H, Gasser, Robin B, Nisbet, Alasdair J, Ranganathan, Shoba
Publicado em 2008

Genome-wide patterns of promoter sharing and co-expression in bovine skeletal muscle

Por Dalrymple Brian P, Hudson Nicholas J, Nagaraj Shivashankar H, Gu Quan, Reverter Antonio
Publicado em 2011-01-01

Genome-wide patterns of promoter sharing and co-expression in bovine skeletal muscle

Por Gu, Quan, Nagaraj, Shivashankar H, Hudson, Nicholas J, Dalrymple, Brian P, Reverter, Antonio
Publicado em 2011

A transcriptomic analysis of the adult stage of the bovine lungworm, Dictyocaulus viviparus

Por Ranganathan, Shoba, Nagaraj, Shivashankar H, Hu, Min, Strube, Christina, Schnieder, Thomas, Gasser, Robin B
Publicado em 2007

Eukaryotic Evolutionary Transitions Are Associated with Extreme Codon Bias in Functionally-Related Proteins

Por Hudson, Nicholas J., Gu, Quan, Nagaraj, Shivashankar H., Ding, Yong-Sheng, Dalrymple, Brian P., Reverter, Antonio
Publicado em 2011

Proteogenomic Analysis of Bradyrhizobium japonicum USDA110 Using Genosuite, an Automated Multi-algorithmic Pipeline

Por Kumar, Dhirendra, Yadav, Amit Kumar, Kadimi, Puneet Kumar, Nagaraj, Shivashankar H., Grimmond, Sean M., Dash, Debasis
Publicado em 2013

Cloning and tissue distribution of novel splice variants of the ovine ghrelin gene

Por Menzies, Moira, Seim, Inge, Josh, Peter, Nagaraj, Shivashankar H, Lees, Michael, Walpole, Carina, Chopin, Lisa K, Colgrave, Michelle, Ingham, Aaron
Publicado em 2014

Transcriptional Changes in the Hookworm, Ancylostoma caninum, during the Transition from a Free-Living to a Parasitic Larva

Por Datu, Bennett J. D., Gasser, Robin B., Nagaraj, Shivashankar H., Ong, Eng K., O'Donoghue, Peter, McInnes, Russell, Ranganathan, Shoba, Loukas, Alex
Publicado em 2008

Association weight matrix for the genetic dissection of puberty in beef cattle

Por Fortes, Marina R. S., Reverter, Antonio, Zhang, Yuandan, Collis, Eliza, Nagaraj, Shivashankar H., Jonsson, Nick N., Prayaga, Kishore C., Barris, Wes, Hawken, Rachel J.
Publicado em 2010

High-throughput functional annotation and data mining with the Blast2GO suite

Por Götz, Stefan, García-Gómez, Juan Miguel, Terol, Javier, Williams, Tim D., Nagaraj, Shivashankar H., Nueda, María José, Robles, Montserrat, Talón, Manuel, Dopazo, Joaquín, Conesa, Ana
Publicado em 2008