The Perchlorate Reduction Genomic Island: Mechanisms and Pathways of Evolution by Horizontal Gene Transfer

Por Melnyk, Ryan A., Coates, John D.
Publicado no BMC Genomics (2015)

Plasmid-powered evolutionary transitions

Por Melnyk, Ryan A, Haney, Cara H
Publicado no eLife (2017)

Convergent gain and loss of genomic islands drive lifestyle changes in plant-associated Pseudomonas

Por Melnyk, Ryan A., Hossain, Sarzana S., Haney, Cara H.
Publicado no ISME J (2019)

Structure and Evolution of Chlorate Reduction Composite Transposons

Por Clark, Iain C., Melnyk, Ryan A., Engelbrektson, Anna, Coates, John D.
Publicado em 2013

Transposon and Deletion Mutagenesis of Genes Involved in Perchlorate Reduction in Azospira suillum PS

Por Melnyk, Ryan A., Clark, Iain C., Liao, Annette, Coates, John D.
Publicado em 2013

Toward a Mechanistic Understanding of Anaerobic Nitrate-Dependent Iron Oxidation: Balancing Electron Uptake and Detoxification

Por Carlson, Hans K., Clark, Iain C., Melnyk, Ryan A., Coates, John D.
Publicado em 2012

Identification of a Perchlorate Reduction Genomic Island with Novel Regulatory and Metabolic Genes

Por Melnyk, Ryan A., Engelbrektson, Anna, Clark, Iain C., Carlson, Hans K., Byrne-Bailey, Kathy, Coates, John D.
Publicado em 2011

Physiological and Genetic Description of Dissimilatory Perchlorate Reduction by the Novel Marine Bacterium Arcobacter sp. Strain CAB

Por Carlström, Charlotte I., Wang, Ouwei, Melnyk, Ryan A., Bauer, Stefan, Lee, Joyce, Engelbrektson, Anna, Coates, John D.
Publicado em 2013

Synthetic and Evolutionary Construction of a Chlorate-Reducing Shewanella oneidensis MR-1

Por Clark, Iain C., Melnyk, Ryan A., Youngblut, Matthew D., Carlson, Hans K., Iavarone, Anthony T., Coates, John D.
Publicado no mBio (2015)

Complete Genome Sequence of the Electricity-Producing “Thermincola potens” Strain JR

Por Byrne-Bailey, Kathryne G., Wrighton, Kelly C., Melnyk, Ryan A., Agbo, Peter, Hazen, Terry C., Coates, John D.
Publicado em 2010

Functional Redundancy in Perchlorate and Nitrate Electron Transport Chains and Rewiring Respiratory Pathways to Alter Terminal Electron Acceptor Preference

Por Wang, Ouwei, Melnyk, Ryan A., Mehta-Kolte, Misha G., Youngblut, Matthew D., Carlson, Hans K., Coates, John D.
Publicado no Front Microbiol (2018)

Comparative Genomics Identified a Genetic Locus in Plant-Associated Pseudomonas spp. That Is Necessary for Induced Systemic Susceptibility

Por Beskrovnaya, Polina, Melnyk, Ryan A., Liu, Zhexian, Liu, Yang, Higgins, Melanie A., Song, Yi, Ryan, Katherine S., Haney, Cara H.
Publicado no mBio (2020)

Erratum for Beskrovnaya et al., “Comparative Genomics Identified a Genetic Locus in Plant-Associated Pseudomonas spp. That Is Necessary for Induced Systemic Susceptibility”

Por Beskrovnaya, Polina, Melnyk, Ryan A., Liu, Zhexian, Liu, Yang, Higgins, Melanie A., Song, Yi, Ryan, Katherine S., Haney, Cara H.
Publicado no mBio (2020)

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics

Por Price, Morgan N., Zane, Grant M., Kuehl, Jennifer V., Melnyk, Ryan A., Wall, Judy D., Deutschbauer, Adam M., Arkin, Adam P.
Publicado no PLoS Genet (2018)

Correction: Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics

Por Price, Morgan N., Zane, Grant M., Kuehl, Jennifer V., Melnyk, Ryan A., Wall, Judy D., Deutschbauer, Adam M., Arkin, Adam P.
Publicado no PLoS Genet (2019)

Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria

Por Carlson, Hans K., Iavarone, Anthony T., Gorur, Amita, Yeo, Boon Siang, Tran, Rosalie, Melnyk, Ryan A., Mathies, Richard A., Auer, Manfred, Coates, John D.
Publicado em 2012

MamO Is a Repurposed Serine Protease that Promotes Magnetite Biomineralization through Direct Transition Metal Binding in Magnetotactic Bacteria

Por Hershey, David M., Ren, Xuefeng, Melnyk, Ryan A., Browne, Patrick J., Ozyamak, Ertan, Jones, Stephanie R., Chang, Michelle C. Y., Hurley, James H., Komeili, Arash
Publicado no PLoS Biol (2016)

A Genome-Wide Screen Identifies Genes in Rhizosphere-Associated Pseudomonas Required to Evade Plant Defenses

Por Liu, Zhexian, Beskrovnaya, Polina, Melnyk, Ryan A., Hossain, Sarzana S., Khorasani, Sophie, O’Sullivan, Lucy R., Wiesmann, Christina L., Bush, Jen, Richard, Joël D., Haney, Cara H.
Publicado no mBio (2018)

Novel Mechanism for Scavenging of Hypochlorite Involving a Periplasmic Methionine-Rich Peptide and Methionine Sulfoxide Reductase

Por Melnyk, Ryan A., Youngblut, Matthew D., Clark, Iain C., Carlson, Hans K., Wetmore, Kelly M., Price, Morgan N., Iavarone, Anthony T., Deutschbauer, Adam M., Arkin, Adam P., Coates, John D.
Publicado no mBio (2015)

Diverse Bacterial Genes Modulate Plant Root Association by Beneficial Bacteria

Por do Amaral, Fernanda Plucani, Tuleski, Thalita Regina, Pankievicz, Vania Carla Silva, Melnyk, Ryan A., Arkin, Adam P., Griffitts, Joel, Tadra-Sfeir, Michelle Zibetti, Maltempi de Souza, Emanuel, Deutschbauer, Adam, Monteiro, Rose Adele, Stacey, Gary
Publicado no mBio (2020)