Rhodopseudomonas palustris Regulons Detected by Cross-Species Analysis of Alphaproteobacterial Genomes

od Conlan, Sean, Lawrence, Charles, McCue, Lee Ann
Wydane 2005

FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool

od Brown, Joseph, Pirrung, Meg, McCue, Lee Ann
Wydane w Bioinformatics (2017)

Making connections between novel transcription factors and their DNA motifs

od Tan, Kai, McCue, Lee Ann, Stormo, Gary D.
Wydane 2005

Identification of a Mycobacterium tuberculosis Putative Classical Nitroreductase Gene Whose Expression Is Coregulated with That of the acr Gene within Macrophages, in Standing vers...

od Purkayastha, Anjan, McCue, Lee Ann, McDonough, Kathleen A.
Wydane 2002

Characterization of Mycobacterium tuberculosis Rv3676 (CRP(Mt)), a Cyclic AMP Receptor Protein-Like DNA Binding Protein

od Bai, Guangchun, McCue, Lee Ann, McDonough, Kathleen A.
Wydane 2005

The Relative Inefficiency of Sequence Weights Approaches in Determining a Nucleotide Position Weight Matrix

od Newberg, Lee A., McCue, Lee Ann, Lawrence, Charles E.
Wydane 2005

Identification and Characterization of a Developmentally Regulated Protein, EshA, Required for Sporogenic Hyphal Branches in Streptomyces griseus

od Kwak, Jangyul, McCue, Lee Ann, Trczianka, Kristen, Kendrick, Kathleen E.
Wydane 2001

Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison

od McCue, Lee Ann, Thompson, William, Carmack, C. Steven, Lawrence, Charles E.
Wydane 2002

Measuring Global Credibility with Application to Local Sequence Alignment

od Webb-Robertson, Bobbie-Jo M., McCue, Lee Ann, Lawrence, Charles E.
Wydane 2008

PhyloScan: identification of transcription factor binding sites using cross-species evidence

od Carmack, C Steven, McCue, Lee Ann, Newberg, Lee A, Lawrence, Charles E
Wydane 2007

The tricarboxylic acid cycle in Shewanella oneidensis is independent of Fur and RyhB control

od Yang, Yunfeng, McCue, Lee Ann, Parsons, Andrea B, Feng, Sheng, Zhou, Jizhong
Wydane 2010

Linking microbial community structure to β-glucosidic function in soil aggregates

od Bailey, Vanessa L, Fansler, Sarah J, Stegen, James C, McCue, Lee Ann
Wydane 2013

ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data

od Kieser, Silas, Brown, Joseph, Zdobnov, Evgeny M., Trajkovski, Mirko, McCue, Lee Ann
Wydane w BMC Bioinformatics (2020)

Identification of Mobile Elements and Pseudogenes in the Shewanella oneidensis MR-1 Genome

od Romine, Margaret F., Carlson, Timothy S., Norbeck, Angela D., McCue, Lee Ann, Lipton, Mary S.
Wydane 2008

SPOCS: software for predicting and visualizing orthology/paralogy relationships among genomes

od Curtis, Darren S., Phillips, Aaron R., Callister, Stephen J., Conlan, Sean, McCue, Lee Ann
Wydane 2013

The Gibbs Centroid Sampler

od Thompson, William A., Newberg, Lee A., Conlan, Sean, McCue, Lee Ann, Lawrence, Charles E.
Wydane 2007

Identification and Characterization of Mycobacterial Proteins Differentially Expressed under Standing and Shaking Culture Conditions, Including Rv2623 from a Novel Class of Putat...

od Florczyk, Matthew A., McCue, Lee Ann, Stack, Robert F., Hauer, Charles R., McDonough, Kathleen A.
Wydane 2001

A Family of acr-Coregulated Mycobacterium tuberculosis Genes Shares a Common DNA Motif and Requires Rv3133c (dosR or devR) for Expression

od Florczyk, Matthew A., McCue, Lee Ann, Purkayastha, Anjan, Currenti, Egidio, Wolin, Meyer J., McDonough, Kathleen A.
Wydane 2003

A phylogenetic Gibbs sampler that yields centroid solutions for cis-regulatory site prediction

od Newberg, Lee A., Thompson, William A., Conlan, Sean, Smith, Thomas M., McCue, Lee Ann, Lawrence, Charles E.
Wydane 2007

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

od McCue, Lee Ann, Thompson, William, Carmack, C. Steven, Ryan, Michael P., Liu, Jun S., Derbyshire, Victoria, Lawrence, Charles E.
Wydane 2001