Genomic divergences among cattle, dog and human estimated from large-scale alignments of genomic sequences

по Liu, George E, Matukumalli, Lakshmi K, Sonstegard, Tad S, Shade, Larry L, Van Tassell, Curtis P
Опубликовано 2006

High-resolution haplotype block structure in the cattle genome

по Villa-Angulo, Rafael, Matukumalli, Lakshmi K, Gill, Clare A, Choi, Jungwoo, Van Tassell, Curtis P, Grefenstette, John J
Опубликовано 2009

SNP-PHAGE – High throughput SNP discovery pipeline

по Matukumalli, Lakshmi K, Grefenstette, John J, Hyten, David L, Choi, Ik-Young, Cregan, Perry B, Van Tassell, Curtis P
Опубликовано 2006

Application of machine learning in SNP discovery

по Matukumalli, Lakshmi K, Grefenstette, John J, Hyten, David L, Choi, Ik-Young, Cregan, Perry B, Van Tassell, Curtis P
Опубликовано 2006

High Density LD-Based Structural Variations Analysis in Cattle Genome

по Salomon-Torres, Ricardo, Matukumalli, Lakshmi K., Van Tassell, Curtis P., Villa-Angulo, Carlos, Gonzalez-Vizcarra, Víctor M., Villa-Angulo, Rafael
Опубликовано 2014

Identification of Conserved Regulatory Elements in Mammalian Promoter Regions: A Case Study Using the PCK1 Promoter

по Liu, George E., Weirauch, Matthew T., Van Tassell, Curtis P., Li, Robert W., Sonstegard, Tad S., Matukumalli, Lakshmi K., Connor, Erin E., Hanson, Richard W., Yang, Jianqi
Опубликовано в: Genomics Proteomics Bioinformatics (2008)

MicroRNA transcriptome profiles during swine skeletal muscle development

по McDaneld, Tara G, Smith, Timothy PL, Doumit, Matthew E, Miles, Jeremy R, Coutinho, Luiz L, Sonstegard, Tad S, Matukumalli, Lakshmi K, Nonneman, Dan J, Wiedmann, Ralph T
Опубликовано 2009

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows

по Cole, John B, Wiggans, George R, Ma, Li, Sonstegard, Tad S, Lawlor, Thomas J, Crooker, Brian A, Van Tassell, Curtis P, Yang, Jing, Wang, Shengwen, Matukumalli, Lakshmi K, Da, Yang
Опубликовано 2011

Genomic characteristics of cattle copy number variations

по Matukumalli Lakshmi K, Kim Eui-soo, Wang Kai, Cardone Maria, Bickhart Derek M, Liu George E, Hou Yali, Ventura Mario, Song Jiuzhou, VanRaden Paul M, Sonstegard Tad S, Van Tassell Curt P
Опубликовано 2011-02-01

Development and Characterization of a High Density SNP Genotyping Assay for Cattle

по Matukumalli, Lakshmi K., Lawley, Cynthia T., Schnabel, Robert D., Taylor, Jeremy F., Allan, Mark F., Heaton, Michael P., O'Connell, Jeff, Moore, Stephen S., Smith, Timothy P. L., Sonstegard, Tad S., Van Tassell, Curtis P.
Опубликовано 2009

Genomic characteristics of cattle copy number variations

по Hou, Yali, Liu, George E, Bickhart, Derek M, Cardone, Maria Francesca, Wang, Kai, Kim, Eui-soo, Matukumalli, Lakshmi K, Ventura, Mario, Song, Jiuzhou, VanRaden, Paul M, Sonstegard, Tad S, Van Tassell, Curt P
Опубликовано 2011

An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation

по Harhay, Gregory P, Smith, Timothy PL, Alexander, Leeson J, Haudenschild, Christian D, Keele, John W, Matukumalli, Lakshmi K, Schroeder, Steven G, Van Tassell, Curtis P, Gresham, Cathy R, Bridges, Susan M, Burgess, Shane C, Sonstegard, Tad S
Опубликовано 2010

Copy number variation of individual cattle genomes using next-generation sequencing

по Bickhart, Derek M., Hou, Yali, Schroeder, Steven G., Alkan, Can, Cardone, Maria Francesca, Matukumalli, Lakshmi K., Song, Jiuzhou, Schnabel, Robert D., Ventura, Mario, Taylor, Jeremy F., Garcia, Jose Fernando, Van Tassell, Curtis P., Sonstegard, Tad S., Eichler, Evan E., Liu, George E.
Опубликовано 2012

An assessment of population structure in eight breeds of cattle using a whole genome SNP panel

по Gao Chuan, Gill Clare A, Neto Emmanuel, Crews Denny, Coppieters Wouter, Aerts Jan, Matukumalli Lakshmi K, Murdoch Brenda M, Schnabel Robert D, McKay Stephanie D, Mannen Hideyuki, Wang Zhiquan, Van Tassell Curt P, Williams John L, Taylor Jeremy F, Moore Stephen S
Опубликовано 2008-05-01

An assessment of population structure in eight breeds of cattle using a whole genome SNP panel

по McKay, Stephanie D, Schnabel, Robert D, Murdoch, Brenda M, Matukumalli, Lakshmi K, Aerts, Jan, Coppieters, Wouter, Crews, Denny, Neto, Emmanuel Dias, Gill, Clare A, Gao, Chuan, Mannen, Hideyuki, Wang, Zhiquan, Van Tassell, Curt P, Williams, John L, Taylor, Jeremy F, Moore, Stephen S
Опубликовано 2008

Whole genome linkage disequilibrium maps in cattle

по Mannen Hideyuki, Gao Chuan, Gill Clare A, Neto Emmanuel, Crews Denny, Coppieters Wouter, Aerts Jan, Matukumalli Lakshmi K, Murdoch Brenda M, Schnabel Robert D, McKay Stephanie D, Stothard Paul, Wang Zhiquan, Van Tassell Curt P, Williams John L, Taylor Jeremy F, Moore Stephen S
Опубликовано 2007-10-01

Whole genome linkage disequilibrium maps in cattle

по McKay, Stephanie D, Schnabel, Robert D, Murdoch, Brenda M, Matukumalli, Lakshmi K, Aerts, Jan, Coppieters, Wouter, Crews, Denny, Neto, Emmanuel Dias, Gill, Clare A, Gao, Chuan, Mannen, Hideyuki, Stothard, Paul, Wang, Zhiquan, Van Tassell, Curt P, Williams, John L, Taylor, Jeremy F, Moore, Stephen S
Опубликовано 2007

A Soybean Transcript Map: Gene Distribution, Haplotype and Single-Nucleotide Polymorphism Analysis

по Choi, Ik-Young, Hyten, David L., Matukumalli, Lakshmi K., Song, Qijian, Chaky, Julian M., Quigley, Charles V., Chase, Kevin, Lark, K. Gordon, Reiter, Robert S., Yoon, Mun-Sup, Hwang, Eun-Young, Yi, Seung-In, Young, Nevin D., Shoemaker, Randy C., van Tassell, Curtis P., Specht, James E., Cregan, Perry B.
Опубликовано 2007

Analysis of copy number variations among diverse cattle breeds

по Liu, George E., Hou, Yali, Zhu, Bin, Cardone, Maria Francesca, Jiang, Lu, Cellamare, Angelo, Mitra, Apratim, Alexander, Leeson J., Coutinho, Luiz L., Dell'Aquila, Maria Elena, Gasbarre, Lou C., Lacalandra, Gianni, Li, Robert W., Matukumalli, Lakshmi K., Nonneman, Dan, de A. Regitano, Luciana C., Smith, Tim P.L., Song, Jiuzhou, Sonstegard, Tad S., Van Tassell, Curt P., Ventura, Mario, Eichler, Evan E., McDaneld, Tara G., Keele, John W.
Опубликовано 2010

A physical map of the bovine genome

по Snelling, Warren M, Chiu, Readman, Schein, Jacqueline E, Hobbs, Matthew, Abbey, Colette A, Adelson, David L, Aerts, Jan, Bennett, Gary L, Bosdet, Ian E, Boussaha, Mekki, Brauning, Rudiger, Caetano, Alexandre R, Costa, Marcos M, Crawford, Allan M, Dalrymple, Brian P, Eggen, André, Everts-van der Wind, Annelie, Floriot, Sandrine, Gautier, Mathieu, Gill, Clare A, Green, Ronnie D, Holt, Robert, Jann, Oliver, Jones, Steven JM, Kappes, Steven M, Keele, John W, de Jong, Pieter J, Larkin, Denis M, Lewin, Harris A, McEwan, John C, McKay, Stephanie, Marra, Marco A, Mathewson, Carrie A, Matukumalli, Lakshmi K, Moore, Stephen S, Murdoch, Brenda, Nicholas, Frank W, Osoegawa, Kazutoyo, Roy, Alice, Salih, Hanni, Schibler, Laurent, Schnabel, Robert D, Silveri, Licia, Skow, Loren C, Smith, Timothy PL, Sonstegard, Tad S, Taylor, Jeremy F, Tellam, Ross, Van Tassell, Curtis P, Williams, John L, Womack, James E, Wye, Natasja H, Yang, George, Zhao, Shaying
Опубликовано 2007