Genomic divergences among cattle, dog and human estimated from large-scale alignments of genomic sequences

por Liu, George E, Matukumalli, Lakshmi K, Sonstegard, Tad S, Shade, Larry L, Van Tassell, Curtis P
Publicado 2006

High-resolution haplotype block structure in the cattle genome

por Villa-Angulo, Rafael, Matukumalli, Lakshmi K, Gill, Clare A, Choi, Jungwoo, Van Tassell, Curtis P, Grefenstette, John J
Publicado 2009

SNP-PHAGE – High throughput SNP discovery pipeline

por Matukumalli, Lakshmi K, Grefenstette, John J, Hyten, David L, Choi, Ik-Young, Cregan, Perry B, Van Tassell, Curtis P
Publicado 2006

Application of machine learning in SNP discovery

por Matukumalli, Lakshmi K, Grefenstette, John J, Hyten, David L, Choi, Ik-Young, Cregan, Perry B, Van Tassell, Curtis P
Publicado 2006

High Density LD-Based Structural Variations Analysis in Cattle Genome

por Salomon-Torres, Ricardo, Matukumalli, Lakshmi K., Van Tassell, Curtis P., Villa-Angulo, Carlos, Gonzalez-Vizcarra, Víctor M., Villa-Angulo, Rafael
Publicado 2014

Identification of Conserved Regulatory Elements in Mammalian Promoter Regions: A Case Study Using the PCK1 Promoter

por Liu, George E., Weirauch, Matthew T., Van Tassell, Curtis P., Li, Robert W., Sonstegard, Tad S., Matukumalli, Lakshmi K., Connor, Erin E., Hanson, Richard W., Yang, Jianqi
Publicado en Genomics Proteomics Bioinformatics (2008)

MicroRNA transcriptome profiles during swine skeletal muscle development

por McDaneld, Tara G, Smith, Timothy PL, Doumit, Matthew E, Miles, Jeremy R, Coutinho, Luiz L, Sonstegard, Tad S, Matukumalli, Lakshmi K, Nonneman, Dan J, Wiedmann, Ralph T
Publicado 2009

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows

por Cole, John B, Wiggans, George R, Ma, Li, Sonstegard, Tad S, Lawlor, Thomas J, Crooker, Brian A, Van Tassell, Curtis P, Yang, Jing, Wang, Shengwen, Matukumalli, Lakshmi K, Da, Yang
Publicado 2011

Genomic characteristics of cattle copy number variations

por Matukumalli Lakshmi K, Kim Eui-soo, Wang Kai, Cardone Maria, Bickhart Derek M, Liu George E, Hou Yali, Ventura Mario, Song Jiuzhou, VanRaden Paul M, Sonstegard Tad S, Van Tassell Curt P
Publicado 2011-02-01

Development and Characterization of a High Density SNP Genotyping Assay for Cattle

por Matukumalli, Lakshmi K., Lawley, Cynthia T., Schnabel, Robert D., Taylor, Jeremy F., Allan, Mark F., Heaton, Michael P., O'Connell, Jeff, Moore, Stephen S., Smith, Timothy P. L., Sonstegard, Tad S., Van Tassell, Curtis P.
Publicado 2009

Genomic characteristics of cattle copy number variations

por Hou, Yali, Liu, George E, Bickhart, Derek M, Cardone, Maria Francesca, Wang, Kai, Kim, Eui-soo, Matukumalli, Lakshmi K, Ventura, Mario, Song, Jiuzhou, VanRaden, Paul M, Sonstegard, Tad S, Van Tassell, Curt P
Publicado 2011

An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation

por Harhay, Gregory P, Smith, Timothy PL, Alexander, Leeson J, Haudenschild, Christian D, Keele, John W, Matukumalli, Lakshmi K, Schroeder, Steven G, Van Tassell, Curtis P, Gresham, Cathy R, Bridges, Susan M, Burgess, Shane C, Sonstegard, Tad S
Publicado 2010

Copy number variation of individual cattle genomes using next-generation sequencing

por Bickhart, Derek M., Hou, Yali, Schroeder, Steven G., Alkan, Can, Cardone, Maria Francesca, Matukumalli, Lakshmi K., Song, Jiuzhou, Schnabel, Robert D., Ventura, Mario, Taylor, Jeremy F., Garcia, Jose Fernando, Van Tassell, Curtis P., Sonstegard, Tad S., Eichler, Evan E., Liu, George E.
Publicado 2012

An assessment of population structure in eight breeds of cattle using a whole genome SNP panel

por Gao Chuan, Gill Clare A, Neto Emmanuel, Crews Denny, Coppieters Wouter, Aerts Jan, Matukumalli Lakshmi K, Murdoch Brenda M, Schnabel Robert D, McKay Stephanie D, Mannen Hideyuki, Wang Zhiquan, Van Tassell Curt P, Williams John L, Taylor Jeremy F, Moore Stephen S
Publicado 2008-05-01

An assessment of population structure in eight breeds of cattle using a whole genome SNP panel

por McKay, Stephanie D, Schnabel, Robert D, Murdoch, Brenda M, Matukumalli, Lakshmi K, Aerts, Jan, Coppieters, Wouter, Crews, Denny, Neto, Emmanuel Dias, Gill, Clare A, Gao, Chuan, Mannen, Hideyuki, Wang, Zhiquan, Van Tassell, Curt P, Williams, John L, Taylor, Jeremy F, Moore, Stephen S
Publicado 2008

Whole genome linkage disequilibrium maps in cattle

por Mannen Hideyuki, Gao Chuan, Gill Clare A, Neto Emmanuel, Crews Denny, Coppieters Wouter, Aerts Jan, Matukumalli Lakshmi K, Murdoch Brenda M, Schnabel Robert D, McKay Stephanie D, Stothard Paul, Wang Zhiquan, Van Tassell Curt P, Williams John L, Taylor Jeremy F, Moore Stephen S
Publicado 2007-10-01

Whole genome linkage disequilibrium maps in cattle

por McKay, Stephanie D, Schnabel, Robert D, Murdoch, Brenda M, Matukumalli, Lakshmi K, Aerts, Jan, Coppieters, Wouter, Crews, Denny, Neto, Emmanuel Dias, Gill, Clare A, Gao, Chuan, Mannen, Hideyuki, Stothard, Paul, Wang, Zhiquan, Van Tassell, Curt P, Williams, John L, Taylor, Jeremy F, Moore, Stephen S
Publicado 2007

A Soybean Transcript Map: Gene Distribution, Haplotype and Single-Nucleotide Polymorphism Analysis

por Choi, Ik-Young, Hyten, David L., Matukumalli, Lakshmi K., Song, Qijian, Chaky, Julian M., Quigley, Charles V., Chase, Kevin, Lark, K. Gordon, Reiter, Robert S., Yoon, Mun-Sup, Hwang, Eun-Young, Yi, Seung-In, Young, Nevin D., Shoemaker, Randy C., van Tassell, Curtis P., Specht, James E., Cregan, Perry B.
Publicado 2007

Analysis of copy number variations among diverse cattle breeds

por Liu, George E., Hou, Yali, Zhu, Bin, Cardone, Maria Francesca, Jiang, Lu, Cellamare, Angelo, Mitra, Apratim, Alexander, Leeson J., Coutinho, Luiz L., Dell'Aquila, Maria Elena, Gasbarre, Lou C., Lacalandra, Gianni, Li, Robert W., Matukumalli, Lakshmi K., Nonneman, Dan, de A. Regitano, Luciana C., Smith, Tim P.L., Song, Jiuzhou, Sonstegard, Tad S., Van Tassell, Curt P., Ventura, Mario, Eichler, Evan E., McDaneld, Tara G., Keele, John W.
Publicado 2010

A physical map of the bovine genome

por Snelling, Warren M, Chiu, Readman, Schein, Jacqueline E, Hobbs, Matthew, Abbey, Colette A, Adelson, David L, Aerts, Jan, Bennett, Gary L, Bosdet, Ian E, Boussaha, Mekki, Brauning, Rudiger, Caetano, Alexandre R, Costa, Marcos M, Crawford, Allan M, Dalrymple, Brian P, Eggen, André, Everts-van der Wind, Annelie, Floriot, Sandrine, Gautier, Mathieu, Gill, Clare A, Green, Ronnie D, Holt, Robert, Jann, Oliver, Jones, Steven JM, Kappes, Steven M, Keele, John W, de Jong, Pieter J, Larkin, Denis M, Lewin, Harris A, McEwan, John C, McKay, Stephanie, Marra, Marco A, Mathewson, Carrie A, Matukumalli, Lakshmi K, Moore, Stephen S, Murdoch, Brenda, Nicholas, Frank W, Osoegawa, Kazutoyo, Roy, Alice, Salih, Hanni, Schibler, Laurent, Schnabel, Robert D, Silveri, Licia, Skow, Loren C, Smith, Timothy PL, Sonstegard, Tad S, Taylor, Jeremy F, Tellam, Ross, Van Tassell, Curtis P, Williams, John L, Womack, James E, Wye, Natasja H, Yang, George, Zhao, Shaying
Publicado 2007