Visualizing, editing and simulating neuronal models with the Open Source Brain 3D explorer

Por Quintana, Adrian, Cantarelli, Matteo, Marin, Boris, Silver, R Angus, Gleeson, Padraig
Publicado no BMC Neurosci (2015)

Bringing rest into consideration: analyzing a database of computational models for multistability of oscillatory and stationary regimes

Por Marin, Bóris, Barnett, William, Doloc-Mihu, Anca, Calabrese, Ronald L, Cymbalyuk, Gennady
Publicado em 2011

Automated code generation from LEMS, the general purpose model specification language underpinning NeuroML2

Por Marin, Boris, Gleeson, Padraig, Cantarelli, Matteo, Cannon, Robert Charles, Silver, Robin Angus
Publicado em 2014

High Prevalence of Multistability of Rest States and Bursting in a Database of a Model Neuron

Por Marin, Bóris, Barnett, William H., Doloc-Mihu, Anca, Calabrese, Ronald L., Cymbalyuk, Gennady S.
Publicado em 2013

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2

Por Cannon, Robert C., Gleeson, Padraig, Crook, Sharon, Ganapathy, Gautham, Marin, Boris, Piasini, Eugenio, Silver, R. Angus
Publicado em 2014

Development and application of a ray-based model of light propagation through a spherical acousto-optic lens

Por Evans, Geoffrey J., Kirkby, Paul A., Nadella, K. M. Naga Srinivas, Marin, Bóris, Silver, R. Angus
Publicado no Opt Express (2015)

Geppetto: a reusable modular open platform for exploring neuroscience data and models

Por Cantarelli, Matteo, Marin, Boris, Quintana, Adrian, Earnshaw, Matt, Court, Robert, Gleeson, Padraig, Dura-Bernal, Salvador, Silver, R. Angus, Idili, Giovanni
Publicado no Philos Trans R Soc Lond B Biol Sci (2018)

Real-time 3D movement correction for two-photon imaging in behaving animals

Por Griffiths, Victoria A., Valera, Antoine M., Lau, Joanna YN., Roš, Hana, Younts, Thomas J., Marin, Bóris, Baragli, Chiara, Coyle, Diccon, Evans, Geoffrey J., Konstantinou, George, Koimtzis, Theo, Nadella, K. M. Naga Srinivas, Punde, Sameer A., Kirkby, Paul A., Bianco, Isaac H., Silver, R. Angus
Publicado no Nat Methods (2020)

Code Generation in Computational Neuroscience: A Review of Tools and Techniques

Por Blundell, Inga, Brette, Romain, Cleland, Thomas A., Close, Thomas G., Coca, Daniel, Davison, Andrew P., Diaz-Pier, Sandra, Fernandez Musoles, Carlos, Gleeson, Padraig, Goodman, Dan F. M., Hines, Michael, Hopkins, Michael W., Kumbhar, Pramod, Lester, David R., Marin, Bóris, Morrison, Abigail, Müller, Eric, Nowotny, Thomas, Peyser, Alexander, Plotnikov, Dimitri, Richmond, Paul, Rowley, Andrew, Rumpe, Bernhard, Stimberg, Marcel, Stokes, Alan B., Tomkins, Adam, Trensch, Guido, Woodman, Marmaduke, Eppler, Jochen Martin
Publicado no Front Neuroinform (2018)

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

Por Gleeson, Padraig, Cantarelli, Matteo, Marin, Boris, Quintana, Adrian, Earnshaw, Matt, Sadeh, Sadra, Piasini, Eugenio, Birgiolas, Justas, Cannon, Robert C., Cayco-Gajic, N. Alex, Crook, Sharon, Davison, Andrew P., Dura-Bernal, Salvador, Ecker, András, Hines, Michael L., Idili, Giovanni, Lanore, Frederic, Larson, Stephen D., Lytton, William W., Majumdar, Amitava, McDougal, Robert A., Sivagnanam, Subhashini, Solinas, Sergio, Stanislovas, Rokas, van Albada, Sacha J., van Geit, Werner, Silver, R. Angus
Publicado no Neuron (2019)

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1

Por Denham, Sue, Poirazi, Panayiota, De Schutter, Erik, Friston, Karl, Chan, Ho Ka, Nowotny, Thomas, Han, Dongqi, Hong, Sungho, Rosay, Sophie, Wernle, Tanja, Treves, Alessandro, Goethals, Sarah, Brette, Romain, Van Pottelbergh, Tomas, Sepulchre, Rodolphe, Bird, Alex D., Cuntz, Hermann, Gonçalves, Pedro J., Lueckmann, Jan-Matthis, Bassetto, Giacomo, Nonnenmacher, Marcel, Macke, Jakob H., Sederberg, Audrey J., MacLean, Jason N., Palmer, Stephanie E., Ferrari, Ulisse, Gardella, Christophe, Marre, Olivier, Mora, Thierry, Ibrahimovic, Emina, Müller, Martin, Pfister, Jean-Pascal, Chauhan, Tushar, Masquelier, Timothée, Montlibert, Alexandre, Cottereau, Benoit R., Helias, Moritz, Schuecker, Jannis, Dahmen, David, Goedeke, Sven, Hyafil, Alexandre, Hermoso-Mendizabal, Ainhoa, Rueda-Orozco, Pavel E., Jaramillo, Santiago, Robbe, David, de la Rocha, Jaime, Rooy, Marie, Koukouli, Fani, DiGregorio, David, Maskos, Uwe, Gutkin, Boris, Verisokin, Andrey Yu, Verveyko, Darya V., Postnov, Dmitry E., Wong, Willy, Talakoub, Omid, Chen, Robert, Popovic, Milos, Lisitsyn, Dmitriy, Drebitz, Eric, Grothe, Iris, Mandon, Sunita, Kreiter, Andreas, Ernst, Udo, Robinson, Peter A., Zhao, Xuelong, Aquino, Kevin M., Griffiths, John D., Mehta-Pandejee, Grishma, Gabay, Natasha, MacLaurin, James, Sarkar, Somwrita, Kunze, Tim, Haueisen, Jens, Knösche, Thomas R., Ahmad, Subutai, Cui, Yuwei, Lewis, Marcus, Hawkins, Jeff, Olmi, Simona, Petkoski, Spase, Bartolomei, Fabrice, Guye, Maxime, Jirsa, Viktor, Toutounji, Hazem, Durstewitz, Daniel, Cantarelli, Matteo, Quintana, Adrian, Marin, Boris, Earnshaw, Matt, Gleeson, Padraig, Court, Robert, McDougal, Robert, Angus Silver, R., Dura-Bernal, Salvador, Larson, Stephen, Lytton, William W., Idili, Giovanni, Posani, Lorenzo, Cocco, Simona, Ježek, Karel, Monasson, Rémi
Publicado no BMC Neurosci (2017)

25th Annual Computational Neuroscience Meeting: CNS-2016

Por Sharpee, Tatyana O., Destexhe, Alain, Kawato, Mitsuo, Sekulić, Vladislav, Skinner, Frances K., Wójcik, Daniel K., Chintaluri, Chaitanya, Cserpán, Dorottya, Somogyvári, Zoltán, Kim, Jae Kyoung, Kilpatrick, Zachary P., Bennett, Matthew R., Josić, Kresimir, Elices, Irene, Arroyo, David, Levi, Rafael, Rodriguez, Francisco B., Varona, Pablo, Hwang, Eunjin, Kim, Bowon, Han, Hio-Been, Kim, Tae, McKenna, James T., Brown, Ritchie E., McCarley, Robert W., Choi, Jee Hyun, Rankin, James, Popp, Pamela Osborn, Rinzel, John, Tabas, Alejandro, Rupp, André, Balaguer-Ballester, Emili, Maturana, Matias I., Grayden, David B., Cloherty, Shaun L., Kameneva, Tatiana, Ibbotson, Michael R., Meffin, Hamish, Koren, Veronika, Lochmann, Timm, Dragoi, Valentin, Obermayer, Klaus, Psarrou, Maria, Schilstra, Maria, Davey, Neil, Torben-Nielsen, Benjamin, Steuber, Volker, Ju, Huiwen, Yu, Jiao, Hines, Michael L., Chen, Liang, Yu, Yuguo, Kim, Jimin, Leahy, Will, Shlizerman, Eli, Birgiolas, Justas, Gerkin, Richard C., Crook, Sharon M., Viriyopase, Atthaphon, Memmesheimer, Raoul-Martin, Gielen, Stan, Dabaghian, Yuri, DeVito, Justin, Perotti, Luca, Kim, Anmo J., Fenk, Lisa M., Cheng, Cheng, Maimon, Gaby, Zhao, Chang, Widmer, Yves, Sprecher, Simon, Senn, Walter, Halnes, Geir, Mäki-Marttunen, Tuomo, Keller, Daniel, Pettersen, Klas H., Andreassen, Ole A., Einevoll, Gaute T., Yamada, Yasunori, Steyn-Ross, Moira L., Alistair Steyn-Ross, D., Mejias, Jorge F., Murray, John D., Kennedy, Henry, Wang, Xiao-Jing, Kruscha, Alexandra, Grewe, Jan, Benda, Jan, Lindner, Benjamin, Badel, Laurent, Ohta, Kazumi, Tsuchimoto, Yoshiko, Kazama, Hokto, Kahng, B., Tam, Nicoladie D., Pollonini, Luca, Zouridakis, George, Soh, Jaehyun, Kim, DaeEun, Yoo, Minsu, Palmer, S. E., Culmone, Viviana, Bojak, Ingo, Ferrario, Andrea, Merrison-Hort, Robert, Borisyuk, Roman, Kim, Chang Sub, Tezuka, Taro, Joo, Pangyu, Rho, Young-Ah, Burton, Shawn D., Bard Ermentrout, G., Jeong, Jaeseung, Urban, Nathaniel N., Marsalek, Petr, Kim, Hoon-Hee, Moon, Seok-hyun, Lee, Do-won, Lee, Sung-beom, Lee, Ji-yong, Molkov, Yaroslav I., Hamade, Khaldoun, Teka, Wondimu, Barnett, William H., Kim, Taegyo, Markin, Sergey, Rybak, Ilya A., Forro, Csaba, Dermutz, Harald, Demkó, László, Vörös, János, Babichev, Andrey, Huang, Haiping, Verduzco-Flores, Sergio, Dos Santos, Filipa, Andras, Peter, Metzner, Christoph, Schweikard, Achim, Zurowski, Bartosz, Roach, James P., Sander, Leonard M., Zochowski, Michal R., Skilling, Quinton M., Ognjanovski, Nicolette, Aton, Sara J., Zochowski, Michal, Wang, Sheng-Jun, Ouyang, Guang, Guang, Jing, Zhang, Mingsha, Michael Wong, K. Y., Zhou, Changsong, Robinson, Peter A., Sanz-Leon, Paula, Drysdale, Peter M., Fung, Felix, Abeysuriya, Romesh G., Rennie, Chris J., Zhao, Xuelong, Choe, Yoonsuck, Yang, Huei-Fang, Mi, Yuanyuan, Lin, Xiaohan, Wu, Si, Liedtke, Joscha, Schottdorf, Manuel, Wolf, Fred, Yamamura, Yoriko, Wickens, Jeffery R., Rumbell, Timothy, Ramsey, Julia, Reyes, Amy, Draguljić, Danel, Hof, Patrick R., Luebke, Jennifer, Weaver, Christina M., He, Hu, Yang, Xu, Ma, Hailin, Xu, Zhiheng, Wang, Yuzhe, Baek, Kwangyeol, Morris, Laurel S., Kundu, Prantik, Voon, Valerie, Agnes, Everton J., Vogels, Tim P., Podlaski, William F., Giese, Martin, Kuravi, Pradeep, Vogels, Rufin, Seeholzer, Alexander, Podlaski, William, Ranjan, Rajnish, Vogels, Tim, Torres, Joaquin J., Baroni, Fabiano, Latorre, Roberto, Gips, Bart, Lowet, Eric, Roberts, Mark J., de Weerd, Peter, Jensen, Ole, van der Eerden, Jan, Goodarzinick, Abdorreza, Niry, Mohammad D., Valizadeh, Alireza, Pariz, Aref, Parsi, Shervin S., Warburton, Julia M., Marucci, Lucia, Tamagnini, Francesco, Brown, Jon, Tsaneva-Atanasova, Krasimira, Kleberg, Florence I., Triesch, Jochen, Moezzi, Bahar, Iannella, Nicolangelo, Schaworonkow, Natalie, Plogmacher, Lukas, Goldsworthy, Mitchell R., Hordacre, Brenton, McDonnell, Mark D., Ridding, Michael C., Zapotocky, Martin, Smit, Daniel, Fouquet, Coralie, Trembleau, Alain, Dasgupta, Sakyasingha, Nishikawa, Isao, Aihara, Kazuyuki, Toyoizumi, Taro, Robb, Daniel T., Mellen, Nick, Toporikova, Natalia, Tang, Rongxiang, Tang, Yi-Yuan, Liang, Guangsheng, Kiser, Seth A., Howard, James H., Goncharenko, Julia, Voronenko, Sergej O., Ahamed, Tosif, Stephens, Greg, Yger, Pierre, Lefebvre, Baptiste, Spampinato, Giulia Lia Beatrice, Esposito, Elric, et Olivier Marre, Marcel Stimberg, Choi, Hansol, Song, Min-Ho, Chung, SueYeon, Lee, Dan D., Sompolinsky, Haim, Phillips, Ryan S., Smith, Jeffrey, Chatzikalymniou, Alexandra Pierri, Ferguson, Katie, Alex Cayco Gajic, N., Clopath, Claudia, Angus Silver, R., Gleeson, Padraig, Marin, Boris, Sadeh, Sadra, Quintana, Adrian, Cantarelli, Matteo, Dura-Bernal, Salvador, Lytton, William W., Davison, Andrew, Li, Luozheng, Zhang, Wenhao, Wang, Dahui, Song, Youngjo, Park, Sol, Choi, Ilhwan, Shin, Hee-sup, Choi, Hannah, Pasupathy, Anitha, Shea-Brown, Eric, Huh, Dongsung, Sejnowski, Terrence J., Vogt, Simon M., Kumar, Arvind, Schmidt, Robert, Van Wert, Stephen, Schiff, Steven J., Veale, Richard, Scheutz, Matthias, Lee, Sang Wan, Gallinaro, Júlia, Rotter, Stefan, Rubchinsky, Leonid L., Cheung, Chung Ching, Ratnadurai-Giridharan, Shivakeshavan, Shomali, Safura Rashid, Ahmadabadi, Majid Nili, Shimazaki, Hideaki, Nader Rasuli, S., Zhao, Xiaochen, Rasch, Malte J., Wilting, Jens, Priesemann, Viola, Levina, Anna, Rudelt, Lucas, Lizier, Joseph T., Spinney, Richard E., Rubinov, Mikail, Wibral, Michael, Bak, Ji Hyun, Pillow, Jonathan, Zaho, Yuan, Park, Il Memming, Kang, Jiyoung, Park, Hae-Jeong, Jang, Jaeson, Paik, Se-Bum, Choi, Woochul, Lee, Changju, Song, Min, Lee, Hyeonsu, Park, Youngjin, Yilmaz, Ergin, Baysal, Veli, Ozer, Mahmut, Saska, Daniel, Nowotny, Thomas, Chan, Ho Ka, Diamond, Alan, Herrmann, Christoph S., Murray, Micah M., Ionta, Silvio, Hutt, Axel, Lefebvre, Jérémie, Weidel, Philipp, Duarte, Renato, Morrison, Abigail, Lee, Jung H., Iyer, Ramakrishnan, Mihalas, Stefan, Koch, Christof, Petrovici, Mihai A., Leng, Luziwei, Breitwieser, Oliver, Stöckel, David, Bytschok, Ilja, Martel, Roman, Bill, Johannes, Schemmel, Johannes, Meier, Karlheinz, Esler, Timothy B., Burkitt, Anthony N., Kerr, Robert R., Tahayori, Bahman, Nolte, Max, Reimann, Michael W., Muller, Eilif, Markram, Henry, Parziale, Antonio, Senatore, Rosa, Marcelli, Angelo, Skiker, K., Maouene, M., Neymotin, Samuel A., Seidenstein, Alexandra, Lakatos, Peter, Sanger, Terence D., Menzies, Rosemary J., McLauchlan, Campbell, van Albada, Sacha J., Kedziora, David J., Neymotin, Samuel, Kerr, Cliff C., Suter, Benjamin A., Shepherd, Gordon M. G., Ryu, Juhyoung, Lee, Sang-Hun, Lee, Joonwon, Lee, Hyang Jung, Lim, Daeseob, Wang, Jisung, Lee, Heonsoo, Jung, Nam, Anh Quang, Le, Maeng, Seung Eun, Lee, Tae Ho, Lee, Jae Woo, Park, Chang-hyun, Ahn, Sora, Moon, Jangsup, Choi, Yun Seo, Kim, Juhee, Jun, Sang Beom, Lee, Seungjun, Lee, Hyang Woon, Jo, Sumin, Jun, Eunji, Yu, Suin, Goetze, Felix, Lai, Pik-Yin, Kim, Seonghyun, Kwag, Jeehyun, Jang, Hyun Jae, Filipović, Marko, Reig, Ramon, Aertsen, Ad, Silberberg, Gilad, Bachmann, Claudia, Buttler, Simone, Jacobs, Heidi, Dillen, Kim, Fink, Gereon R., Kukolja, Juraj, Kepple, Daniel, Giaffar, Hamza, Rinberg, Dima, Shea, Steven, Koulakov, Alex, Bahuguna, Jyotika, Tetzlaff, Tom, Kotaleski, Jeanette Hellgren, Kunze, Tim, Peterson, Andre, Knösche, Thomas, Kim, Minjung, Kim, Hojeong, Park, Ji Sung, Yeon, Ji Won, Kim, Sung-Phil, Kang, Jae-Hwan, Lee, Chungho, Spiegler, Andreas, Petkoski, Spase, Palva, Matias J., Jirsa, Viktor K., Saggio, Maria L., Siep, Silvan F., Stacey, William C., Bernar, Christophe, Choung, Oh-hyeon, Jeong, Yong, Lee, Yong-il, Kim, Su Hyun, Jeong, Mir, Lee, Jeungmin, Kwon, Jaehyung, Kralik, Jerald D., Jahng, Jaehwan, Hwang, Dong-Uk, Kwon, Jae-Hyung, Park, Sang-Min, Kim, Seongkyun, Kim, Hyoungkyu, Kim, Pyeong Soo, Yoon, Sangsup, Lim, Sewoong, Park, Choongseok, Miller, Thomas, Clements, Katie, Ahn, Sungwoo, Ji, Eoon Hye, Issa, Fadi A., Baek, JeongHun, Oba, Shigeyuki, Yoshimoto, Junichiro, Doya, Kenji, Ishii, Shin, Mosqueiro, Thiago S., Strube-Bloss, Martin F., Smith, Brian, Huerta, Ramon, Hadrava, Michal, Hlinka, Jaroslav, Bos, Hannah, Helias, Moritz, Welzig, Charles M., Harper, Zachary J., Kim, Won Sup, Shin, In-Seob, Baek, Hyeon-Man, Han, Seung Kee, Richter, René, Vitay, Julien, Beuth, Frederick, Hamker, Fred H., Toppin, Kelly, Guo, Yixin, Graham, Bruce P., Kale, Penelope J., Gollo, Leonardo L., Stern, Merav, Abbott, L. F., Fedorov, Leonid A., Giese, Martin A., Ardestani, Mohammad Hovaidi, Faraji, Mohammad Javad, Preuschoff, Kerstin, Gerstner, Wulfram, van Gendt, Margriet J., Briaire, Jeroen J., Kalkman, Randy K., Frijns, Johan H. M., Lee, Won Hee, Frangou, Sophia, Fulcher, Ben D., Tran, Patricia H. P., Fornito, Alex, Gliske, Stephen V., Lim, Eugene, Holman, Katherine A., Fink, Christian G., Kim, Jinseop S., Mu, Shang, Briggman, Kevin L., Sebastian Seung, H., Wegener, Detlef, Bohnenkamp, Lisa, Ernst, Udo A., Devor, Anna, Dale, Anders M., Lines, Glenn T., Edwards, Andy, Tveito, Aslak, Hagen, Espen, Senk, Johanna, Diesmann, Markus, Schmidt, Maximilian, Bakker, Rembrandt, Shen, Kelly, Bezgin, Gleb, Hilgetag, Claus-Christian, van Albada, Sacha Jennifer, Sun, Haoqi, Sourina, Olga, Huang, Guang-Bin, Klanner, Felix, Denk, Cornelia, Glomb, Katharina, Ponce-Alvarez, Adrián, Gilson, Matthieu, Ritter, Petra, Deco, Gustavo, Witek, Maria A. G., Clarke, Eric F., Hansen, Mads, Wallentin, Mikkel, Kringelbach, Morten L., Vuust, Peter, Klingbeil, Guido, De Schutter, Erik, Chen, Weiliang, Zang, Yunliang, Hong, Sungho, Takashima, Akira, Zamora, Criseida, Gallimore, Andrew R., Goldschmidt, Dennis, Manoonpong, Poramate, Karoly, Philippa J., Freestone, Dean R., Soundry, Daniel, Kuhlmann, Levin, Paninski, Liam, Cook, Mark, Lee, Jaejin, Fishman, Yonatan I., Cohen, Yale E., Roberts, James A., Cocchi, Luca, Sweeney, Yann, Lee, Soohyun, Jung, Woo-Sung, Kim, Youngsoo, Jung, Younginha, Song, Yoon-Kyu, Chavane, Frédéric, Soman, Karthik, Muralidharan, Vignesh, Srinivasa Chakravarthy, V., Shivkumar, Sabyasachi, Mandali, Alekhya, Pragathi Priyadharsini, B., Mehta, Hima, Davey, Catherine E., Brinkman, Braden A. W., Kekona, Tyler, Rieke, Fred, Buice, Michael, De Pittà, Maurizio, Berry, Hugues, Brunel, Nicolas, Breakspear, Michael, Marsat, Gary, Drew, Jordan, Chapman, Phillip D., Daly, Kevin C., Bradle, Samual P., Seo, Sat Byul, Su, Jianzhong, Kavalali, Ege T., Blackwell, Justin, Shiau, LieJune, Buhry, Laure, Basnayake, Kanishka, Lee, Sue-Hyun, Levy, Brandon A., Baker, Chris I., Leleu, Timothée, Philips, Ryan T., Chhabria, Karishma
Publicado no BMC Neurosci (2016)