Filling reference gaps via assembling DNA barcodes using high-throughput sequencing—moving toward barcoding the world

by Liu, Shanlin, Yang, Chentao, Zhou, Chengran, Zhou, Xin
Published in Gigascience (2017)

MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization

by Meng, Guanliang, Li, Yiyuan, Yang, Chentao, Liu, Shanlin
Published in Nucleic Acids Res (2019)

Evolution of neuropeptides in non-pterygote hexapods

by Derst, Christian, Dircksen, Heinrich, Meusemann, Karen, Zhou, Xin, Liu, Shanlin, Predel, Reinhard
Published in BMC Evol Biol (2016)

NAC selectively inhibit cancer telomerase activity: A higher redox homeostasis threshold exists in cancer cells

by Li, Pengying, Wu, Meilin, Wang, Jing, Sui, Yilun, Liu, Shanlin, Shi, Dongyun
Published in Redox Biol (2015)

A New Method for Measuring the Rotational Angles of a Precision Spherical Joint Using Eddy Current Sensors

by Hu, Penghao, Zhao, Linchao, Tang, Chuxin, Liu, Shanlin, Dang, Xueming, Hu, Yi
Published in Sensors (Basel) (2020)

Positive and relaxed selection associated with flight evolution and loss in insect transcriptomes

by Mitterboeck, T. Fatima, Liu, Shanlin, Adamowicz, Sarah J., Fu, Jinzhong, Zhang, Rui, Song, Wenhui, Meusemann, Karen, Zhou, Xin
Published in Gigascience (2017)

Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification

by Zhou, Xin, Li, Yiyuan, Liu, Shanlin, Yang, Qing, Su, Xu, Zhou, Lili, Tang, Min, Fu, Ribei, Li, Jiguang, Huang, Quanfei
Published 2013

Viromics of extant insect orders unveil the evolution of the flavi-like superfamily

by Paraskevopoulou, Sofia, Käfer, Simon, Zirkel, Florian, Donath, Alexander, Petersen, Malte, Liu, Shanlin, Zhou, Xin, Drosten, Christian, Misof, Bernhard, Junglen, Sandra
Published in Virus Evol (2021)

The molecular evolutionary dynamics of oxidative phosphorylation (OXPHOS) genes in Hymenoptera

by Li, Yiyuan, Zhang, Rui, Liu, Shanlin, Donath, Alexander, Peters, Ralph S., Ware, Jessica, Misof, Bernhard, Niehuis, Oliver, Pfrender, Michael E., Zhou, Xin
Published in BMC Evol Biol (2017)

Functional characterization of the Hyles euphorbiae hawkmoth transcriptome reveals strong expression of phorbol ester detoxification and seasonal cold hardiness genes

by Barth, M. Benjamin, Buchwalder, Katja, Kawahara, Akito Y., Zhou, Xin, Liu, Shanlin, Krezdorn, Nicolas, Rotter, Björn, Horres, Ralf, Hundsdoerfer, Anna K.
Published in Front Zool (2018)

Multiplex sequencing of pooled mitochondrial genomes—a crucial step toward biodiversity analysis using mito-metagenomics

by Tang, Min, Tan, Meihua, Meng, Guanliang, Yang, Shenzhou, Su, Xu, Liu, Shanlin, Song, Wenhui, Li, Yiyuan, Wu, Qiong, Zhang, Aibing, Zhou, Xin
Published in Nucleic Acids Res (2014)

De Novo Transcriptome Analysis of the Common New Zealand Stick Insect Clitarchus hookeri (Phasmatodea) Reveals Genes Involved in Olfaction, Digestion and Sexual Reproduction

by Wu, Chen, Crowhurst, Ross N., Dennis, Alice B., Twort, Victoria G., Liu, Shanlin, Newcomb, Richard D., Ross, Howard A., Buckley, Thomas R.
Published in PLoS One (2016)

Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes

by Petersen, Malte, Meusemann, Karen, Donath, Alexander, Dowling, Daniel, Liu, Shanlin, Peters, Ralph S., Podsiadlowski, Lars, Vasilikopoulos, Alexandros, Zhou, Xin, Misof, Bernhard, Niehuis, Oliver
Published in BMC Bioinformatics (2017)

Phylogenetic Origin and Diversification of RNAi Pathway Genes in Insects

by Dowling, Daniel, Pauli, Thomas, Donath, Alexander, Meusemann, Karen, Podsiadlowski, Lars, Petersen, Malte, Peters, Ralph S., Mayer, Christoph, Liu, Shanlin, Zhou, Xin, Misof, Bernhard, Niehuis, Oliver
Published in Genome Biol Evol (2016)

A Phylogenomic Analysis of Lichen-Feeding Tiger Moths Uncovers Evolutionary Origins of Host Chemical Sequestration

by Chialvo, Clare H. Scott, Chialvo, Pablo, Holland, Jeffrey D., Anderson, Timothy J., Breinholt, Jesse W., Kawahara, Akito Y., Zhou, Xin, Liu, Shanlin, Zaspel, Jennifer M.
Published in Mol Phylogenet Evol (2017)

Identification of transcription factor genes involved in anthocyanin biosynthesis in carrot (Daucus carota L.) using RNA-Seq

by Kodama, Miyako, Brinch-Pedersen, Henrik, Sharma, Shrikant, Holme, Inger Bæksted, Joernsgaard, Bjarne, Dzhanfezova, Tsaneta, Amby, Daniel Buchvaldt, Vieira, Filipe Garrett, Liu, Shanlin, Gilbert, M Thomas P
Published in BMC Genomics (2018)

Re-assessing the diversity of negative strand RNA viruses in insects

by Käfer, Simon, Paraskevopoulou, Sofia, Zirkel, Florian, Wieseke, Nicolas, Donath, Alexander, Petersen, Malte, Jones, Terry C., Liu, Shanlin, Zhou, Xin, Middendorf, Martin, Junglen, Sandra, Misof, Bernhard, Drosten, Christian
Published in PLoS Pathog (2019)

Phylogenomic analysis sheds light on the evolutionary pathways towards acoustic communication in Orthoptera

by Song, Hojun, Béthoux, Olivier, Shin, Seunggwan, Donath, Alexander, Letsch, Harald, Liu, Shanlin, McKenna, Duane D., Meng, Guanliang, Misof, Bernhard, Podsiadlowski, Lars, Zhou, Xin, Wipfler, Benjamin, Simon, Sabrina
Published in Nat Commun (2020)

Author Correction: Phylogenomic analysis sheds light on the evolutionary pathways towards acoustic communication in Orthoptera

by Song, Hojun, Béthoux, Olivier, Shin, Seunggwan, Donath, Alexander, Letsch, Harald, Liu, Shanlin, McKenna, Duane D., Meng, Guanliang, Misof, Bernhard, Podsiadlowski, Lars, Zhou, Xin, Wipfler, Benjamin, Simon, Sabrina
Published in Nat Commun (2020)

Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacific Biosciences Sequel II system and ultralong reads of Oxford Nanopore

by Lang, Dandan, Zhang, Shilai, Ren, Pingping, Liang, Fan, Sun, Zongyi, Meng, Guanliang, Tan, Yuntao, Li, Xiaokang, Lai, Qihua, Han, Lingling, Wang, Depeng, Hu, Fengyi, Wang, Wen, Liu, Shanlin
Published in Gigascience (2020)