Quadruplex-forming DNA sequences spread by retrotransposons may serve as genome regulators

od Kejnovsky, Eduard, Lexa, Matej
Izdano 2014

What Can Long Terminal Repeats Tell Us About the Age of LTR Retrotransposons, Gene Conversion and Ectopic Recombination?

od Jedlicka, Pavel, Lexa, Matej, Kejnovsky, Eduard
Izdano u Front Plant Sci (2020)

Quadruplex DNA in long terminal repeats in maize LTR retrotransposons inhibits the expression of a reporter gene in yeast

od Tokan, Viktor, Puterova, Janka, Lexa, Matej, Kejnovsky, Eduard
Izdano u BMC Genomics (2018)

Dynamics of Endogenous Cytokinin Pools in Tobacco Seedlings: a Modelling Approach

od LEXA, MATEJ, GENKOV, TODOR, MALBECK, JIŘÍ, MACHÁČKOVÁ, IVANA, BRZOBOHATÝ, BŘETISLAV
Izdano u Ann Bot (2003)

Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico stud...

od Jedlicka, Pavel, Lexa, Matej, Vanat, Ivan, Hobza, Roman, Kejnovsky, Eduard
Izdano u Mob DNA (2019)

Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions:...

od Jedlicka, Pavel, Lexa, Matej, Vanat, Ivan, Hobza, Roman, Kejnovsky, Eduard
Izdano u Mob DNA (2020)

TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting

od Lexa, Matej, Jedlicka, Pavel, Vanat, Ivan, Cervenansky, Michal, Kejnovsky, Eduard
Izdano u Bioinformatics (2020)

Hammock: a hidden Markov model-based peptide clustering algorithm to identify protein-interaction consensus motifs in large datasets

od Krejci, Adam, Hupp, Ted R., Lexa, Matej, Vojtesek, Borivoj, Muller, Petr
Izdano u Bioinformatics (2016)

Quadruplex-forming sequences occupy discrete regions inside plant LTR retrotransposons

od Lexa, Matej, Kejnovský, Eduard, Šteflová, Pavlína, Konvalinová, Helena, Vorlíčková, Michaela, Vyskot, Boris
Izdano 2014

Guanine quadruplexes are formed by specific regions of human transposable elements

od Lexa, Matej, Steflova, Pavlina, Martinek, Tomas, Vorlickova, Michaela, Vyskot, Boris, Kejnovsky, Eduard
Izdano u BMC Genomics (2014)

Effects of Isoflavone-Enriched Feed on the Rumen Microbiota in Dairy Cows

od Kasparovska, Jitka, Pecinkova, Martina, Dadakova, Katerina, Krizova, Ludmila, Hadrova, Sylvie, Lexa, Matej, Lochman, Jan, Kasparovsky, Tomas
Izdano u PLoS One (2016)

Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strains

od Bartas, Martin, Goswami, Pratik, Lexa, Matej, Červeň, Jiří, Volná, Adriana, Fojta, Miroslav, Brázda, Václav, Pečinka, Petr
Izdano u Brief Bioinform (2021)

Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY(1)Y(2)) in the Dioecious Plant Rumex acetosa

od Steflova, Pavlina, Tokan, Viktor, Vogel, Ivan, Lexa, Matej, Macas, Jiri, Novak, Petr, Hobza, Roman, Vyskot, Boris, Kejnovsky, Eduard
Izdano 2013

The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery

od Fiedorová, Kristýna, Radvanský, Matěj, Němcová, Eva, Grombiříková, Hana, Bosák, Juraj, Černochová, Michaela, Lexa, Matej, Šmajs, David, Freiberger, Tomáš
Izdano u Front Microbiol (2019)

Escherichia coli Strains Producing Selected Bacteriocins Inhibit Porcine Enterotoxigenic Escherichia coli (ETEC) under both In Vitro and In Vivo Conditions

od Hrala, Matěj, Bosák, Juraj, Micenková, Lenka, Křenová, Jitka, Lexa, Matej, Pirková, Viktória, Tomáštíková, Zuzana, Koláčková, Ivana, Šmajs, David
Izdano u Appl Environ Microbiol (2021)

Patients With Common Variable Immunodeficiency (CVID) Show Higher Gut Bacterial Diversity and Levels of Low-Abundance Genes Than the Healthy Housemates

od Bosák, Juraj, Lexa, Matej, Fiedorová, Kristýna, Gadara, Darshak C., Micenková, Lenka, Spacil, Zdenek, Litzman, Jiří, Freiberger, Tomáš, Šmajs, David
Izdano u Front Immunol (2021)

High-throughput analysis revealed mutations’ diverging effects on SMN1 exon 7 splicing

od Souček, Přemysl, Réblová, Kamila, Kramárek, Michal, Radová, Lenka, Grymová, Tereza, Hujová, Pavla, Kováčová, Tatiana, Lexa, Matej, Grodecká, Lucie, Freiberger, Tomáš
Izdano u RNA Biol (2019)

SARS-CoV-2 hot-spot mutations are significantly enriched within inverted repeats and CpG island loci

od Goswami, Pratik, Bartas, Martin, Lexa, Matej, Bohálová, Natália, Volná, Adriana, Červeň, Jiří, Červeňová, Veronika, Pečinka, Petr, Špunda, Vladimír, Fojta, Miroslav, Brázda, Václav
Izdano u Brief Bioinform (2020)

Preferential Binding of Hot Spot Mutant p53 Proteins to Supercoiled DNA In Vitro and in Cells

od Brázdová, Marie, Navrátilová, Lucie, Tichý, Vlastimil, Němcová, Kateřina, Lexa, Matej, Hrstka, Roman, Pečinka, Petr, Adámik, Matej, Vojtesek, Borivoj, Paleček, Emil, Deppert, Wolfgang, Fojta, Miroslav
Izdano 2013

Bacterial but Not Fungal Gut Microbiota Alterations Are Associated With Common Variable Immunodeficiency (CVID) Phenotype

od Fiedorová, Kristýna, Radvanský, Matěj, Bosák, Juraj, Grombiříková, Hana, Němcová, Eva, Králíčková, Pavlína, Černochová, Michaela, Kotásková, Iva, Lexa, Matej, Litzman, Jiří, Šmajs, David, Freiberger, Tomáš
Izdano u Front Immunol (2019)