Genome-wide prediction of bacterial effector candidates across six secretion system types using a feature-based statistical framework

מאת Dhroso, Andi, Eidson, Samantha, Korkin, Dmitry
הוצא לאור ב Sci Rep (2018)

Enriching Human Interactome with Functional Mutations to Detect High-Impact Network Modules Underlying Complex Diseases

מאת Cui, Hongzhu, Srinivasan, Suhas, Korkin, Dmitry
הוצא לאור ב Genes (Basel) (2019)

DISPOT: a simple knowledge-based protein domain interaction statistical potential

מאת Narykov, Oleksandr, Bogatov, Dmytro, Korkin, Dmitry
הוצא לאור ב Bioinformatics (2019)

Localization of protein-binding sites within families of proteins

מאת Korkin, Dmitry, Davis, Fred P., Sali, Andrej
יצא לאור 2005

Incorporation of protein binding effects into likelihood ratio test for exome sequencing data

מאת Zhang, Dongni, Cui, Hongzhu, Korkin, Dmitry, Wu, Zheyang
הוצא לאור ב BMC Proc (2016)

A hybrid deep clustering approach for robust cell type profiling using single-cell RNA-seq data

מאת Srinivasan, Suhas, Leshchyk, Anastasia, Johnson, Nathan T., Korkin, Dmitry
הוצא לאור ב RNA (2020)

Structural Similarity and Classification of Protein Interaction Interfaces

מאת Zhao, Nan, Pang, Bin, Shyu, Chi-Ren, Korkin, Dmitry
יצא לאור 2011

Variable domain I of nematode CLEs directs post-translational targeting of CLE peptides to the extracellular space

מאת Wang, Jianying, Joshi, Sneha, Korkin, Dmitry, Mitchum, Melissa G
יצא לאור 2010

Charged residues at protein interaction interfaces: Unexpected conservation and orchestrated divergence

מאת Zhao, Nan, Pang, Bin, Shyu, Chi-Ren, Korkin, Dmitry
יצא לאור 2011

Extreme Evolutionary Conservation of Functionally Important Regions in H1N1 Influenza Proteome

מאת Warren, Samantha, Wan, Xiu-Feng, Conant, Gavin, Korkin, Dmitry
יצא לאור 2013

Biological classification with RNA-seq data: Can alternatively spliced transcript expression enhance machine learning classifiers?

מאת Johnson, Nathan T., Dhroso, Andi, Hughes, Katelyn J., Korkin, Dmitry
הוצא לאור ב RNA (2018)

Determining Effects of Non-synonymous SNPs on Protein-Protein Interactions using Supervised and Semi-supervised Learning

מאת Zhao, Nan, Han, Jing Ginger, Shyu, Chi-Ren, Korkin, Dmitry
יצא לאור 2014

Accelerating large-scale protein structure alignments with graphics processing units

מאת Pang Bin, Zhao Nan, Becchi Michela, Korkin Dmitry, Shyu Chi-Ren
יצא לאור 2012-02-01

Accelerating large-scale protein structure alignments with graphics processing units

מאת Pang, Bin, Zhao, Nan, Becchi, Michela, Korkin, Dmitry, Shyu, Chi-Ren
יצא לאור 2012

PBSword: a web server for searching similar protein–protein binding sites

מאת Pang, Bin, Kuang, Xingyan, Zhao, Nan, Korkin, Dmitry, Shyu, Chi-Ren
יצא לאור 2012

Evidence of Positive Selection in Mitochondrial Complexes I and V of the African Elephant

מאת Finch, Tabitha M., Zhao, Nan, Korkin, Dmitry, Frederick, Katy H., Eggert, Lori S.
יצא לאור 2014

DOMMINO 2.0: integrating structurally resolved protein-, RNA-, and DNA-mediated macromolecular interactions

מאת Kuang, Xingyan, Dhroso, Andi, Han, Jing Ginger, Shyu, Chi-Ren, Korkin, Dmitry
הוצא לאור ב Database (Oxford) (2016)

ProteinDBS v2.0: a web server for global and local protein structure search

מאת Shyu, Chi-Ren, Pang, Bin, Chi, Pin-Hao, Zhao, Nan, Korkin, Dmitry, Xu, Dong
יצא לאור 2010

DOMMINO: a database of macromolecular interactions

מאת Kuang, Xingyan, Han, Jing Ginger, Zhao, Nan, Pang, Bin, Shyu, Chi-Ren, Korkin, Dmitry
יצא לאור 2012

Controlled modification of biomolecules by ultrashort laser pulses in polar liquids

מאת Gruzdev, Vitaly, Korkin, Dmitry, Mooney, Brian P., Havelund, Jesper F., Møller, Ian Max, Thelen, Jay J.
הוצא לאור ב Sci Rep (2017)