GENN: A GEneral Neural Network forLearning Tabulated Data With Examples From Protein Structure Prediction

af Faraggi, Eshel, Kloczkowski, Andrzej
Udgivet i Methods Mol Biol (2015)

Packing Regularities in Biological Structures Relate to Their Dynamics

af Jernigan, Robert L., Kloczkowski, Andrzej
Udgivet 2007

Accurate single-sequence prediction of solvent accessible surface area using local and global features

af Faraggi, Eshel, Zhou, Yaoqi, Kloczkowski, Andrzej
Udgivet i Proteins (2014)

Shape-dependent designability studies of lattice proteins

af Peto, Myron, Kloczkowski, Andrzej, Jernigan, Robert L.
Udgivet 2007

Chain dimensions and fluctuations in elastomeric networks in which the junctions alternate regularly in their functionality

af Skliros, Aris, Mark, James E., Kloczkowski, Andrzej
Udgivet 2009

Models to Approximate the Motions of Protein Loops

af Skliros, Aris, Jernigan, Robert L., Kloczkowski, Andrzej
Udgivet 2010

Orientational distributions of contact clusters in proteins closely resemble those of an icosahedron

af Feng, Yaping, Jernigan, Robert L., Kloczkowski, Andrzej
Udgivet 2008

Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials

af Feng, Yaping, Kloczkowski, Andrzej, Jernigan, Robert L
Udgivet 2010

MAVENs: Motion analysis and visualization of elastic networks and structural ensembles

af Zimmermann, Michael T, Kloczkowski, Andrzej, Jernigan, Robert L
Udgivet 2011

A Hybrid Levenberg–Marquardt Algorithm on a Recursive Neural Network for Scoring Protein Models

af Faraggi, Eshel, Jernigan, Robert L, Kloczkowski, Andrzej
Udgivet i Methods Mol Biol (2021)

Functional clustering of yeast proteins from the protein-protein interaction network

af Sen, Taner Z, Kloczkowski, Andrzej, Jernigan, Robert L
Udgivet 2006

Structural interpretation of protein-protein interaction network

af Katebi, Ataur R, Kloczkowski, Andrzej, Jernigan, Robert L
Udgivet 2010

BioShell-Threading: versatile Monte Carlo package for protein 3D threading

af Gniewek, Pawel, Kolinski, Andrzej, Kloczkowski, Andrzej, Gront, Dominik
Udgivet 2014

Predicting Designability of Small Proteins from Graph Features of Contact Maps

af Leelananda, Sumudu P., Jernigan, Robert L., Kloczkowski, Andrzej
Udgivet i J Comput Biol (2016)

Fold-specific sequence scoring improves protein sequence matching

af Leelananda, Sumudu P., Kloczkowski, Andrzej, Jernigan, Robert L.
Udgivet i BMC Bioinformatics (2016)

Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder

af Faraggi, Eshel, Dunker, Keith, Sussman, Joel, Kloczkowski, Andrzej
Udgivet i J Biomol Struct Dyn (2017)

Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable

af Honavar Vasant, Kloczkowski Andrzej, Peto Myron, Jernigan Robert L
Udgivet 2008-11-01

Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable

af Peto, Myron, Kloczkowski, Andrzej, Honavar, Vasant, Jernigan, Robert L
Udgivet 2008

Effects of protein subunits removal on the computed motions of partial 30S structures of the ribosome

af Yan, Aimin, Wang, Yongmei, Kloczkowski, Andrzej, Jernigan, Robert L.
Udgivet 2008

The energy profiles of atomic conformational transition intermediates of adenylate kinase

af Feng, Yaping, Yang, Lei, Kloczkowski, Andrzej, Jernigan, Robert L.
Udgivet 2009