GENN: A GEneral Neural Network forLearning Tabulated Data With Examples From Protein Structure Prediction

Por Faraggi, Eshel, Kloczkowski, Andrzej
Publicado no Methods Mol Biol (2015)

Packing Regularities in Biological Structures Relate to Their Dynamics

Por Jernigan, Robert L., Kloczkowski, Andrzej
Publicado em 2007

Accurate single-sequence prediction of solvent accessible surface area using local and global features

Por Faraggi, Eshel, Zhou, Yaoqi, Kloczkowski, Andrzej
Publicado no Proteins (2014)

Shape-dependent designability studies of lattice proteins

Por Peto, Myron, Kloczkowski, Andrzej, Jernigan, Robert L.
Publicado em 2007

Chain dimensions and fluctuations in elastomeric networks in which the junctions alternate regularly in their functionality

Por Skliros, Aris, Mark, James E., Kloczkowski, Andrzej
Publicado em 2009

Models to Approximate the Motions of Protein Loops

Por Skliros, Aris, Jernigan, Robert L., Kloczkowski, Andrzej
Publicado em 2010

Orientational distributions of contact clusters in proteins closely resemble those of an icosahedron

Por Feng, Yaping, Jernigan, Robert L., Kloczkowski, Andrzej
Publicado em 2008

Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials

Por Feng, Yaping, Kloczkowski, Andrzej, Jernigan, Robert L
Publicado em 2010

MAVENs: Motion analysis and visualization of elastic networks and structural ensembles

Por Zimmermann, Michael T, Kloczkowski, Andrzej, Jernigan, Robert L
Publicado em 2011

A Hybrid Levenberg–Marquardt Algorithm on a Recursive Neural Network for Scoring Protein Models

Por Faraggi, Eshel, Jernigan, Robert L, Kloczkowski, Andrzej
Publicado no Methods Mol Biol (2021)

Functional clustering of yeast proteins from the protein-protein interaction network

Por Sen, Taner Z, Kloczkowski, Andrzej, Jernigan, Robert L
Publicado em 2006

Structural interpretation of protein-protein interaction network

Por Katebi, Ataur R, Kloczkowski, Andrzej, Jernigan, Robert L
Publicado em 2010

BioShell-Threading: versatile Monte Carlo package for protein 3D threading

Por Gniewek, Pawel, Kolinski, Andrzej, Kloczkowski, Andrzej, Gront, Dominik
Publicado em 2014

Predicting Designability of Small Proteins from Graph Features of Contact Maps

Por Leelananda, Sumudu P., Jernigan, Robert L., Kloczkowski, Andrzej
Publicado no J Comput Biol (2016)

Fold-specific sequence scoring improves protein sequence matching

Por Leelananda, Sumudu P., Kloczkowski, Andrzej, Jernigan, Robert L.
Publicado no BMC Bioinformatics (2016)

Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder

Por Faraggi, Eshel, Dunker, Keith, Sussman, Joel, Kloczkowski, Andrzej
Publicado no J Biomol Struct Dyn (2017)

Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable

Por Honavar Vasant, Kloczkowski Andrzej, Peto Myron, Jernigan Robert L
Publicado em 2008-11-01

Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable

Por Peto, Myron, Kloczkowski, Andrzej, Honavar, Vasant, Jernigan, Robert L
Publicado em 2008

Effects of protein subunits removal on the computed motions of partial 30S structures of the ribosome

Por Yan, Aimin, Wang, Yongmei, Kloczkowski, Andrzej, Jernigan, Robert L.
Publicado em 2008

The energy profiles of atomic conformational transition intermediates of adenylate kinase

Por Feng, Yaping, Yang, Lei, Kloczkowski, Andrzej, Jernigan, Robert L.
Publicado em 2009