Is Oxford Nanopore sequencing ready for analyzing complex microbiomes?

per Kerkhof, Lee J
Publicat a FEMS Microbiol Ecol (2021)

Diversity of Nitrous Oxide Reductase (nosZ) Genes in Continental Shelf Sediments

per Scala, David J., Kerkhof, Lee J.
Publicat 1999

Horizontal Heterogeneity of Denitrifying Bacterial Communities in Marine Sediments by Terminal Restriction Fragment Length Polymorphism Analysis

per Scala, David J., Kerkhof, Lee J.
Publicat 2000

Fingerprinting Microbial Assemblages from the Oxic/Anoxic Chemocline of the Black Sea

per Vetriani, Costantino, Tran, Hiep V., Kerkhof, Lee J.
Publicat 2003

Crenarchaeal heterotrophy in salt marsh sediments

per Seyler, Lauren M, McGuinness, Lora M, Kerkhof, Lee J
Publicat 2014

Spatial Distribution of Total, Ammonia-Oxidizing, and Denitrifying Bacteria in Biological Wastewater Treatment Reactors for Bioregenerative Life Support

per Sakano, Yuko, Pickering, Karen D., Strom, Peter F., Kerkhof, Lee J.
Publicat 2002

Detection of 2,4,6-Trinitrotoluene-Utilizing Anaerobic Bacteria by (15)N and (13)C Incorporation

per Gallagher, Erin M., Young, Lily Y., McGuinness, Lora M., Kerkhof, Lee J.
Publicat 2010

Profiling bacterial communities by MinION sequencing of ribosomal operons

per Kerkhof, Lee J., Dillon, Kevin P., Häggblom, Max M., McGuinness, Lora R.
Publicat a Microbiome (2017)

Detection and Characterization of a Dehalogenating Microorganism by Terminal Restriction Fragment Length Polymorphism Fingerprinting of 16S rRNA in a Sulfidogenic, 2-Bromophenol-Ut...

per Fennell, Donna E., Rhee, Sung-Keun, Ahn, Young-Beom, Häggblom, Max M., Kerkhof, Lee J.
Publicat 2004

Quantifying Nonspecific TEM β-Lactamase (bla(TEM)) Genes in a Wastewater Stream

per Lachmayr, Karen L., Kerkhof, Lee J., DiRienzo, A. Gregory, Cavanaugh, Colleen M., Ford, Timothy E.
Publicat 2009

Identification of Bacteria Synthesizing Ribosomal RNA in Response to Uranium Addition During Biostimulation at the Rifle, CO Integrated Field Research Site

per McGuinness, Lora R., Wilkins, Michael J., Williams, Kenneth H., Long, Philip E., Kerkhof, Lee J.
Publicat a PLoS One (2015)

BioDry: An Inexpensive, Low-Power Method to Preserve Aquatic Microbial Biomass at Room Temperature

per Tuorto, Steven J., Brown, Chris M., Bidle, Kay D., McGuinness, Lora R., Kerkhof, Lee J.
Publicat a PLoS One (2015)

Reductive Dehalogenation of Brominated Phenolic Compounds by Microorganisms Associated with the Marine Sponge Aplysina aerophoba

per Ahn, Young-Beom, Rhee, Sung-Keun, Fennell, Donna E., Kerkhof, Lee J., Hentschel, Ute, Häggblom, Max M.
Publicat 2003

Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS)

per Deshpande, Samir V., Reed, Timothy M., Sullivan, Raymond F., Kerkhof, Lee J., Beigel, Keith M., Wade, Mary M.
Publicat a Genes (Basel) (2019)

Bacterial genome replication at subzero temperatures in permafrost

per Tuorto, Steven J, Darias, Phillip, McGuinness, Lora R, Panikov, Nicolai, Zhang, Tingjun, Häggblom, Max M, Kerkhof, Lee J
Publicat 2014

Sulfate-Reducing Naphthalene Degraders Are Picky Eaters

per Wolfson, Sarah J., Porter, Abigail W., Kerkhof, Lee J., McGuinness, Lora M., Prince, Roger C., Young, Lily Y.
Publicat a Microorganisms (2018)

Species-level evaluation of the human respiratory microbiome

per Ibironke, Olufunmilola, McGuinness, Lora R, Lu, Shou-En, Wang, Yaquan, Hussain, Sabiha, Weisel, Clifford P, Kerkhof, Lee J
Publicat a Gigascience (2020)

The Effect of Diet and Exercise on Intestinal Integrity and Microbial Diversity in Mice

per Campbell, Sara C., Wisniewski, Paul J., Noji, Michael, McGuinness, Lora R., Häggblom, Max M., Lightfoot, Stanley A., Joseph, Laurie B., Kerkhof, Lee J.
Publicat a PLoS One (2016)

Spatial Distribution of an Uranium-Respiring Betaproteobacterium at the Rifle, CO Field Research Site

per Koribanics, Nicole M., Tuorto, Steven J., Lopez-Chiaffarelli, Nora, McGuinness, Lora R., Häggblom, Max M., Williams, Kenneth H., Long, Philip E., Kerkhof, Lee J.
Publicat a PLoS One (2015)

Lactobacillus rhamnosus GG modifies the metabolome of pathobionts in gnotobiotic mice

per Kim, Jinhee, Balasubramanian, Iyshwarya, Bandyopadhyay, Sheila, Nadler, Ian, Singh, Rajbir, Harlan, Danielle, Bumber, Amanda, He, Yuling, Kerkhof, Lee J., Gao, Nan, Su, Xiaoyang, Ferraris, Ronaldo P.
Publicat a BMC Microbiol (2021)