Ongoing Phenotypic and Genomic Changes in Experimental Coevolution of RNA Bacteriophage Qβ and Escherichia coli

par Kashiwagi, Akiko, Yomo, Tetsuya
Publié 2011

Characterization of a single mutation in TraQ in a strain of Escherichia coli partially resistant to Qβ infection

par Kashiwagi, Akiko, Kitamura, Hikari, Sano Tsushima, Fumie
Publié dans Front Microbiol (2015)

The Single-Stranded RNA Bacteriophage Qβ Adapts Rapidly to High Temperatures: An Evolution Experiment

par Hossain, Md. Tanvir, Yokono, Toma, Kashiwagi, Akiko
Publié dans Viruses (2020)

Adaptive Response of a Gene Network to Environmental Changes by Fitness-Induced Attractor Selection

par Kashiwagi, Akiko, Urabe, Itaru, Kaneko, Kunihiko, Yomo, Tetsuya
Publié 2006

Inherent characteristics of gene expression for buffering environmental changes without the corresponding transcriptional regulations

par Suzuki, Takao, Kashiwagi, Akiko, Urabe, Itaru, Yomo, Tetsuya
Publié dans Biophysics (Nagoya-shi) (2006)

Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays

par Suzuki, Shingo, Ono, Naoaki, Furusawa, Chikara, Kashiwagi, Akiko, Yomo, Tetsuya
Publié 2007

Ubiquity of log-normal distributions in intra-cellular reaction dynamics

par Furusawa, Chikara, Suzuki, Takao, Kashiwagi, Akiko, Yomo, Tetsuya, Kaneko, Kunihiko
Publié dans Biophysics (Nagoya-shi) (2005)

Contribution of Silent Mutations to Thermal Adaptation of RNA Bacteriophage Qβ

par Kashiwagi, Akiko, Sugawara, Ryu, Sano Tsushima, Fumie, Kumagai, Tomofumi, Yomo, Tetsuya
Publié 2014

Insight into the sequence specificity of a probe on an Affymetrix GeneChip by titration experiments using only one oligonucleotide

par Suzuki, Shingo, Furusawa, Chikara, Ono, Naoaki, Kashiwagi, Akiko, Urabe, Itaru, Yomo, Tetsuya
Publié dans Biophysics (Nagoya-shi) (2007)

A Lytic Bacteriophage for Controlling Pseudomonas lactis in Raw Cow's Milk

par Tanaka, Chikage, Yamada, Kohsuke, Takeuchi, Honami, Inokuchi, Yoshio, Kashiwagi, Akiko, Toba, Takahiro
Publié dans Appl Environ Microbiol (2018)

An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays

par Ono, Naoaki, Suzuki, Shingo, Furusawa, Chikara, Agata, Tomoharu, Kashiwagi, Akiko, Shimizu, Hiroshi, Yomo, Tetsuya
Publié 2008

Cooperative Adaptation to Establishment of a Synthetic Bacterial Mutualism

par Hosoda, Kazufumi, Suzuki, Shingo, Yamauchi, Yoshinori, Shiroguchi, Yasunori, Kashiwagi, Akiko, Ono, Naoaki, Mori, Kotaro, Yomo, Tetsuya
Publié 2011

Adaptation by stochastic switching of a monostable genetic circuit in Escherichia coli

par Tsuru, Saburo, Yasuda, Nao, Murakami, Yoshie, Ushioda, Junya, Kashiwagi, Akiko, Suzuki, Shingo, Mori, Kotaro, Ying, Bei-Wen, Yomo, Tetsuya
Publié 2011

Adaptation of a Cyanobacterium to a Biochemically Rich Environment in Experimental Evolution as an Initial Step toward a Chloroplast-Like State

par Hosoda, Kazufumi, Habuchi, Masumi, Suzuki, Shingo, Miyazaki, Mikako, Takikawa, Go, Sakurai, Takahiro, Kashiwagi, Akiko, Sueyoshi, Makoto, Matsumoto, Yusuke, Kiuchi, Ayako, Mori, Kotaro, Yomo, Tetsuya
Publié 2014

Transition from Positive to Neutral in Mutation Fixation along with Continuing Rising Fitness in Thermal Adaptive Evolution

par Kishimoto, Toshihiko, Iijima, Leo, Tatsumi, Makoto, Ono, Naoaki, Oyake, Ayana, Hashimoto, Tomomi, Matsuo, Moe, Okubo, Masato, Suzuki, Shingo, Mori, Kotaro, Kashiwagi, Akiko, Furusawa, Chikara, Ying, Bei-Wen, Yomo, Tetsuya
Publié 2010