Identification and functional characterization of cis-regulatory elements in the apicomplexan parasite Toxoplasma gondii

Por Mullapudi, Nandita, Joseph, Sandeep J, Kissinger, Jessica C
Publicado em 2009

Genome-wide upstream motif analysis of Cryptosporidium parvum genes clustered by expression profile

Por Oberstaller, Jenna, Joseph, Sandeep J, Kissinger, Jessica C
Publicado em 2013

Comparison of Two Output-Coding Strategies for Multi-Class Tumor Classification Using Gene Expression Data and Latent Variable Model as Binary Classifier

Por Joseph, Sandeep J., Robbins, Kelly R., Zhang, Wensheng, Rekaya, Romdhane
Publicado em 2010

Interplay of recombination and selection in the genomes of Chlamydia trachomatis

Por Joseph, Sandeep J, Didelot, Xavier, Gandhi, Khanjan, Dean, Deborah, Read, Timothy D
Publicado em 2011

Tetracycline Selective Pressure and Homologous Recombination Shape the Evolution of Chlamydia suis: A Recently Identified Zoonotic Pathogen

Por Joseph, Sandeep J., Marti, Hanna, Didelot, Xavier, Read, Timothy D., Dean, Deborah
Publicado no Genome Biol Evol (2016)

Omega-6 Fat Supplementation Alters Lipogenic Gene Expression in Bovine Subcutaneous Adipose Tissue

Por Joseph, Sandeep J., Pratt, Scott L., Pavan, Enrique, Rekaya, Romdhane, Duckett., Susan K.
Publicado em 2010

Comparative Analysis of Chlamydia psittaci Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range

Por Read, Timothy D., Joseph, Sandeep J., Didelot, Xavier, Liang, Brooke, Patel, Lisa, Dean, Deborah
Publicado em 2013

Tet(C) Gene Transfer between Chlamydia suis Strains Occurs by Homologous Recombination after Co-infection: Implications for Spread of Tetracycline-Resistance among Chlamydiaceae

Por Marti, Hanna, Kim, Hoyon, Joseph, Sandeep J., Dojiri, Stacey, Read, Timothy D., Dean, Deborah
Publicado no Front Microbiol (2017)

Chlamydiaceae Genomics Reveals Interspecies Admixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans

Por Joseph, Sandeep J., Marti, Hanna, Didelot, Xavier, Castillo-Ramirez, Santiago, Read, Timothy D., Dean, Deborah
Publicado no Genome Biol Evol (2015)

Effect of Diet Supplementation on the Expression of Bovine Genes Associated with Fatty Acid Synthesis and Metabolism

Por Joseph, Sandeep J., Robbins, Kelly R., Pavan, Enrique, Pratt, Scott L., Duckett, Susan K., Rekaya, Romdhane
Publicado em 2010

Characterization of a spermine/spermidine transport system reveals a novel DNA sequence duplication in Neisseria gonorrhoeae

Por Goytia, Maira, Hawel, Leo, Dhulipala, Vijaya L., Joseph, Sandeep J., Read, Timothy D., Shafer, William M.
Publicado no FEMS Microbiol Lett (2015)

The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data

Por Joseph, Sandeep J., Li, Ben, Petit III, Robert A., Qin, Zhaohui S., Darrow, Lyndsey, Read, Timothy D.
Publicado no PeerJ (2016)

Direct Amplification, Sequencing and Profiling of Chlamydia trachomatis Strains in Single and Mixed Infection Clinical Samples

Por Joseph, Sandeep J., Li, Ben, Ghonasgi, Tanvi, Haase, Chad P., Qin, Zhaohui S., Dean, Deborah, Read, Timothy D.
Publicado em 2014

Phase-Variable Expression of lptA Modulates the Resistance of Neisseria gonorrhoeae to Cationic Antimicrobial Peptides

Por Kandler, Justin L., Joseph, Sandeep J., Balthazar, Jacqueline T., Dhulipala, Vijaya, Read, Timothy D., Jerse, Ann E., Shafer, William M.
Publicado em 2014

Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure

Por Joseph, Sandeep J., Didelot, Xavier, Rothschild, James, de Vries, Henry J.C., Morré, Servaas A., Read, Timothy D., Dean, Deborah
Publicado em 2012

Overproduction of the MtrCDE Efflux Pump in Neisseria gonorrhoeae Produces Unexpected Changes in Cellular Transcription Patterns

Por Ohneck, Elizabeth A., Goytia, Maira, Rouquette-Loughlin, Corinne E., Joseph, Sandeep J., Read, Timothy D., Jerse, Ann E., Shafer, William M.
Publicado no Antimicrob Agents Chemother (2014)

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L(2)) and D Lineages

Por Somboonna, Naraporn, Wan, Raymond, Ojcius, David M., Pettengill, Matthew A., Joseph, Sandeep J., Chang, Alexander, Hsu, Ray, Read, Timothy D., Dean, Deborah
Publicado em 2011

A Multiplexed Microfluidic PCR Assay for Sensitive and Specific Point-of-Care Detection of Chlamydia trachomatis

Por Dean, Deborah, Turingan, Rosemary S., Thomann, Hans-Ulrich, Zolotova, Anna, Rothschild, James, Joseph, Sandeep J., Read, Timothy D., Tan, Eugene, Selden, Richard F.
Publicado em 2012

Rapid detection and strain typing of Chlamydia trachomatis using a highly multiplexed microfluidic PCR assay

Por Turingan, Rosemary S., Kaplun, Ludmila, Krautz-Peterson, Greice, Norsworthy, Sarah, Zolotova, Anna, Joseph, Sandeep J., Read, Timothy D., Dean, Deborah, Tan, Eugene, Selden, Richard F.
Publicado no PLoS One (2017)

Dynamics of genome change among Legionella species

Por Joseph, Sandeep J., Cox, Daniel, Wolff, Bernard, Morrison, Shatavia S., Kozak-Muiznieks, Natalia A., Frace, Michael, Didelot, Xavier, Castillo-Ramirez, Santiago, Winchell, Jonas, Read, Timothy D., Dean, Deborah
Publicado no Sci Rep (2016)