Comparing biological networks via graph compression

Por Hayashida, Morihiro, Akutsu, Tatsuya
Publicado em 2010

Integer programming-based method for grammar-based tree compression and its application to pattern extraction of glycan tree structures

Por Zhao, Yang, Hayashida, Morihiro, Akutsu, Tatsuya
Publicado em 2010

Survival Analysis by Penalized Regression and Matrix Factorization

Por Lai, Yeuntyng, Hayashida, Morihiro, Akutsu, Tatsuya
Publicado em 2013

Maximum margin classifier working in a set of strings

Por Koyano, Hitoshi, Hayashida, Morihiro, Akutsu, Tatsuya
Publicado no Proc Math Phys Eng Sci (2016)

LBSizeCleav: improved support vector machine (SVM)-based prediction of Dicer cleavage sites using loop/bulge length

Por Bao, Yu, Hayashida, Morihiro, Akutsu, Tatsuya
Publicado no BMC Bioinformatics (2016)

Conditional random field approach to prediction of protein-protein interactions using domain information

Por Hayashida, Morihiro, Kamada, Mayumi, Song, Jiangning, Akutsu, Tatsuya
Publicado em 2011

Prediction of Heterodimeric Protein Complexes from Weighted Protein-Protein Interaction Networks Using Novel Features and Kernel Functions

Por Ruan, Peiying, Hayashida, Morihiro, Maruyama, Osamu, Akutsu, Tatsuya
Publicado em 2013

Prediction of protein-RNA residue-base contacts using two-dimensional conditional random field with the lasso

Por Hayashida, Morihiro, Kamada, Mayumi, Song, Jiangning, Akutsu, Tatsuya
Publicado em 2013

Prediction of heterotrimeric protein complexes by two-phase learning using neighboring kernels

Por Ruan, Peiying, Hayashida, Morihiro, Maruyama, Osamu, Akutsu, Tatsuya
Publicado em 2014

Prediction of Protein-Protein Interaction Strength Using Domain Features with Supervised Regression

Por Kamada, Mayumi, Sakuma, Yusuke, Hayashida, Morihiro, Akutsu, Tatsuya
Publicado em 2014

Parallelization of enumerating tree-like chemical compounds by breadth-first search order

Por Hayashida, Morihiro, Jindalertudomdee, Jira, Zhao, Yang, Akutsu, Tatsuya
Publicado no BMC Med Genomics (2015)

Enumeration method for tree-like chemical compounds with benzene rings and naphthalene rings by breadth-first search order

Por Jindalertudomdee, Jira, Hayashida, Morihiro, Zhao, Yang, Akutsu, Tatsuya
Publicado no BMC Bioinformatics (2016)

Grammar-based compression approach to extraction of common rules among multiple trees of glycans and RNAs

Por Zhao, Yang, Hayashida, Morihiro, Cao, Yue, Hwang, Jaewook, Akutsu, Tatsuya
Publicado no BMC Bioinformatics (2015)

Algorithms and Complexity Analyses for Control of Singleton Attractors in Boolean Networks

Por Hayashida, Morihiro, Tamura, Takeyuki, Akutsu, Tatsuya, Zhang, Shu-Qin, Ching, Wai-Ki
Publicado em 2008

Algorithms for Finding Small Attractors in Boolean Networks

Por Zhang, Shu-Qin, Hayashida, Morihiro, Akutsu, Tatsuya, Ching, Wai-Ki, Ng, Michael K
Publicado em 2007

SecretEPDB: a comprehensive web-based resource for secreted effector proteins of the bacterial types III, IV and VI secretion systems

Por An, Yi, Wang, Jiawei, Li, Chen, Revote, Jerico, Zhang, Yang, Naderer, Thomas, Hayashida, Morihiro, Akutsu, Tatsuya, Webb, Geoffrey I., Lithgow, Trevor, Song, Jiangning
Publicado no Sci Rep (2017)