The Roles of Standing Genetic Variation and Evolutionary History in Determining the Evolvability of Anti-Predator Strategies

Por O'Donnell, Daniel R., Parigi, Abhijna, Fish, Jordan A., Dworkin, Ian, Wagner, Aaron P.
Publicado em 2014

FunGene: the functional gene pipeline and repository

Por Fish, Jordan A., Chai, Benli, Wang, Qiong, Sun, Yanni, Brown, C. Titus, Tiedje, James M., Cole, James R.
Publicado em 2013

Xander: employing a novel method for efficient gene-targeted metagenomic assembly

Por Wang, Qiong, Fish, Jordan A., Gilman, Mariah, Sun, Yanni, Brown, C. Titus, Tiedje, James M., Cole, James R.
Publicado no Microbiome (2015)

Ecological Patterns of nifH Genes in Four Terrestrial Climatic Zones Explored with Targeted Metagenomics Using FrameBot, a New Informatics Tool

Por Wang, Qiong, Quensen, John F., Fish, Jordan A., Kwon Lee, Tae, Sun, Yanni, Tiedje, James M., Cole, James R.
Publicado em 2013

Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering

Por Sul, Woo Jun, Cole, James R., Jesus, Ederson da C., Wang, Qiong, Farris, Ryan J., Fish, Jordan A., Tiedje, James M.
Publicado em 2011

Ribosomal Database Project: data and tools for high throughput rRNA analysis

Por Cole, James R., Wang, Qiong, Fish, Jordan A., Chai, Benli, McGarrell, Donna M., Sun, Yanni, Brown, C. Titus, Porras-Alfaro, Andrea, Kuske, Cheryl R., Tiedje, James M.
Publicado em 2014

Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay

Por Chai, Benli, Tsoi, Tamara V., Iwai, Shoko, Liu, Cun, Fish, Jordan A., Gu, Cheng, Johnson, Timothy A., Zylstra, Gerben, Teppen, Brian J., Li, Hui, Hashsham, Syed A., Boyd, Stephen A., Cole, James R., Tiedje, James M.
Publicado no PLoS One (2016)

The khmer software package: enabling efficient nucleotide sequence analysis

Por Crusoe, Michael R., Alameldin, Hussien F., Awad, Sherine, Boucher, Elmar, Caldwell, Adam, Cartwright, Reed, Charbonneau, Amanda, Constantinides, Bede, Edvenson, Greg, Fay, Scott, Fenton, Jacob, Fenzl, Thomas, Fish, Jordan, Garcia-Gutierrez, Leonor, Garland, Phillip, Gluck, Jonathan, González, Iván, Guermond, Sarah, Guo, Jiarong, Gupta, Aditi, Herr, Joshua R., Howe, Adina, Hyer, Alex, Härpfer, Andreas, Irber, Luiz, Kidd, Rhys, Lin, David, Lippi, Justin, Mansour, Tamer, McA'Nulty, Pamela, McDonald, Eric, Mizzi, Jessica, Murray, Kevin D., Nahum, Joshua R., Nanlohy, Kaben, Nederbragt, Alexander Johan, Ortiz-Zuazaga, Humberto, Ory, Jeramia, Pell, Jason, Pepe-Ranney, Charles, Russ, Zachary N., Schwarz, Erich, Scott, Camille, Seaman, Josiah, Sievert, Scott, Simpson, Jared, Skennerton, Connor T., Spencer, James, Srinivasan, Ramakrishnan, Standage, Daniel, Stapleton, James A., Steinman, Susan R., Stein, Joe, Taylor, Benjamin, Trimble, Will, Wiencko, Heather L., Wright, Michael, Wyss, Brian, Zhang, Qingpeng, zyme, en, Brown, C. Titus
Publicado no F1000Res (2015)