Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress

Por Belamkar, Vikas, Weeks, Nathan T, Bharti, Arvind K, Farmer, Andrew D, Graham, Michelle A, Cannon, Steven B
Publicado no BMC Genomics (2014)

Genomics-assisted characterization of a breeding collection of Apios americana, an edible tuberous legume

Por Belamkar, Vikas, Farmer, Andrew D., Weeks, Nathan T., Kalberer, Scott R., Blackmon, William J., Cannon, Steven B.
Publicado no Sci Rep (2016)

Development of an Alfalfa SNP Array and Its Use to Evaluate Patterns of Population Structure and Linkage Disequilibrium

Por Li, Xuehui, Han, Yuanhong, Wei, Yanling, Acharya, Ananta, Farmer, Andrew D., Ho, Julie, Monteros, Maria J., Brummer, E. Charles
Publicado em 2014

Venturing Beyond Beans and Peas: What Can We Learn from Chamaecrista?

Por Singer, Susan R., Maki, Sonja L., Farmer, Andrew D., Ilut, Dan, May, Gregory D., Cannon, Steven B., Doyle, Jeff J.
Publicado em 2009

Polyploidy Did Not Predate the Evolution of Nodulation in All Legumes

Por Cannon, Steven B., Ilut, Dan, Farmer, Andrew D., Maki, Sonja L., May, Gregory D., Singer, Susan R., Doyle, Jeff J.
Publicado em 2010

Characterization of a set of novel meiotically-active promoters in Arabidopsis

Por Li, Junhua, Farmer, Andrew D, Lindquist, Ingrid E, Dukowic-Schulze, Stefanie, Mudge, Joann, Li, Tao, Retzel, Ernest F, Chen, Changbin
Publicado em 2012

Genetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea

Por Gujaria-Verma, Neha, Vail, Sally L., Carrasquilla-Garcia, Noelia, Penmetsa, R. Varma, Cook, Douglas R., Farmer, Andrew D., Vandenberg, Albert, Bett, Kirstin E.
Publicado no Front Plant Sci (2014)

Small RNA profiles in soybean primary root tips under water deficit

Por Zheng, Yun, Hivrale, Vandana, Zhang, Xiaotuo, Valliyodan, Babu, Lelandais-Brière, Christine, Farmer, Andrew D., May, Gregory D., Crespi, Martin, Nguyen, Henry T., Sunkar, Ramanjulu
Publicado no BMC Syst Biol (2016)

Meiosis-specific gene discovery in plants: RNA-Seq applied to isolated Arabidopsis male meiocytes

Por Chen, Changbin, Farmer, Andrew D, Langley, Raymond J, Mudge, Joann, Crow, John A, May, Gregory D, Huntley, James, Smith, Alan G, Retzel, Ernest F
Publicado em 2010

Population Genomics of the Facultatively Mutualistic Bacteria Sinorhizobium meliloti and S. medicae

Por Epstein, Brendan, Branca, Antoine, Mudge, Joann, Bharti, Arvind K., Briskine, Roman, Farmer, Andrew D., Sugawara, Masayuki, Young, Nevin D., Sadowsky, Michael J., Tiffin, Peter
Publicado em 2012

Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications

Por Kudapa, Himabindu, Azam, Sarwar, Sharpe, Andrew G., Taran, Bunyamin, Li, Rong, Deonovic, Benjamin, Cameron, Connor, Farmer, Andrew D., Cannon, Steven B., Varshney, Rajeev K.
Publicado em 2014

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

Por Shoemaker Randy C, Fickus Edward W, Weeks Nathan, Song Qijian, Cannon Steven B, Hyten David L, Specht James E, Farmer Andrew D, May Gregory D, Cregan Perry B
Publicado em 2010-01-01

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

Por Hyten, David L, Cannon, Steven B, Song, Qijian, Weeks, Nathan, Fickus, Edward W, Shoemaker, Randy C, Specht, James E, Farmer, Andrew D, May, Gregory D, Cregan, Perry B
Publicado em 2010

The transcriptome landscape of early maize meiosis

Por Dukowic-Schulze, Stefanie, Sundararajan, Anitha, Mudge, Joann, Ramaraj, Thiruvarangan, Farmer, Andrew D, Wang, Minghui, Sun, Qi, Pillardy, Jaroslaw, Kianian, Shahryar, Retzel, Ernest F, Pawlowski, Wojciech P, Chen, Changbin
Publicado em 2014

Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing

Por Li, Xuehui, Acharya, Ananta, Farmer, Andrew D, Crow, John A, Bharti, Arvind K, Kramer, Robin S, Wei, Yanling, Han, Yuanhong, Gou, Jiqing, May, Gregory D, Monteros, Maria J, Brummer, E Charles
Publicado em 2012

The Medicago Genome Initiative: a model legume database

Por Bell, Callum J., Dixon, Richard A., Farmer, Andrew D., Flores, Raul, Inman, Jeff, Gonzales, Robert A., Harrison, Maria J., Paiva, Nancy L., Scott, Angela D., Weller, Jennifer W., May, Gregory D.
Publicado em 2001

Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes

Por Zhou, Peng, Silverstein, Kevin A. T., Ramaraj, Thiruvarangan, Guhlin, Joseph, Denny, Roxanne, Liu, Junqi, Farmer, Andrew D., Steele, Kelly P., Stupar, Robert M., Miller, Jason R., Tiffin, Peter, Mudge, Joann, Young, Nevin D.
Publicado no BMC Genomics (2017)

Development and characterization of BAC-end sequence derived SSRs, and their incorporation into a new higher density genetic map for cultivated peanut (Arachis hypogaea L.)

Por Wang, Hui, Penmetsa, R Varma, Yuan, Mei, Gong, Limin, Zhao, Yongli, Guo, Baozhu, Farmer, Andrew D, Rosen, Benjamin D, Gao, Jinliang, Isobe, Sachiko, Bertioli, David J, Varshney, Rajeev K, Cook, Douglas R, He, Guohao
Publicado em 2012

Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family

Por Dash, Sudhansu, Campbell, Jacqueline D., Cannon, Ethalinda K.S., Cleary, Alan M., Huang, Wei, Kalberer, Scott R., Karingula, Vijay, Rice, Alex G., Singh, Jugpreet, Umale, Pooja E., Weeks, Nathan T., Wilkey, Andrew P., Farmer, Andrew D., Cannon, Steven B.
Publicado no Nucleic Acids Res (2016)

An Integrative Approach to Genomic Introgression Mapping(1)([W])([OA])

Por Severin, Andrew J., Peiffer, Gregory A., Xu, Wayne W., Hyten, David L., Bucciarelli, Bruna, O’Rourke, Jamie A., Bolon, Yung-Tsi, Grant, David, Farmer, Andrew D., May, Gregory D., Vance, Carroll P., Shoemaker, Randy C., Stupar, Robert M.
Publicado em 2010