Sequence features responsible for intron retention in human

Por Sakabe, Noboru Jo, de Souza, Sandro José
Publicado em 2007

Intron positions correlate with module boundaries in ancient proteins

Por de Souza, Sandro Jose, Long, Manyuan, Schoenbach, Lloyd, Roy, Scott William, Gilbert, Walter
Publicado em 1996

Detection and evaluation of intron retention events in the human transcriptome

Por GALANTE, PEDRO ALEXANDRE FAVORETTO, SAKABE, NOBORU JO, KIRSCHBAUM-SLAGER, NATANJA, DE SOUZA, SANDRO JOSÉ
Publicado em 2004

Uncovering association networks through an eQTL analysis involving human miRNAs and lincRNAs

Por Branco, Paulo R., de Araújo, Gilderlanio S., Barrera, Júnior, Suarez-Kurtz, Guilherme, de Souza, Sandro José
Publicado no Sci Rep (2018)

Sex‐biased gene expression in the frontal cortex of common marmosets (Callithrix jacchus) and potential behavioral correlates

Por Nogueira, Viviane Brito, Imparato, Danilo Oliveira, de Souza, Sandro José, de Sousa, Maria Bernardete Cordeiro
Publicado no Brain Behav (2018)

AMIN domains have a predicted role in localization of diverse periplasmic protein complexes

Por de Souza, Robson Francisco, Anantharaman, Vivek, de Souza, Sandro José, Aravind, L., Gueiros-Filho, Frederico J.
Publicado em 2008

A comprehensive in silico expression analysis of RNA binding proteins in normal and tumor tissue: Identification of potential players in tumor formation

Por Galante, Pedro A.F., Sandhu, Devraj, de Sousa Abreu, Raquel, Gradassi, Michael, Slager, Natanja, Vogel, Christine, de Souza, Sandro Jose, Penalva, Luiz O.F.
Publicado em 2009

On the Impact of the Pangenome and Annotation Discrepancies While Building Protein Sequence Databases for Bacteria Proteogenomics

Por Machado, Karla C. T., Fortuin, Suereta, Tomazella, Gisele Guicardi, Fonseca, Andre F., Warren, Robin Mark, Wiker, Harald G., de Souza, Sandro Jose, de Souza, Gustavo Antonio
Publicado no Front Microbiol (2019)

The Human Cell Surfaceome of Breast Tumors

Por da Cunha, Júlia Pinheiro Chagas, Galante, Pedro Alexandre Favoretto, de Souza, Jorge Estefano Santana, Pieprzyk, Martin, Carraro, Dirce Maria, Old, Lloyd J., Camargo, Anamaria Aranha, de Souza, Sandro José
Publicado em 2013

Influence of BRCA1 Germline Mutations in the Somatic Mutational Burden of Triple-Negative Breast Cancer

Por Ferreira, Elisa Napolitano, Brianese, Rafael Canfield, de Almeida, Renan Valieris Bueno, Drummond, Rodrigo Duarte, de Souza, Jorge Estefano, da Silva, Israel Tojal, de Souza, Sandro José, Carraro, Dirce Maria
Publicado no Transl Oncol (2019)

SurfaceomeDB: a cancer-orientated database for genes encoding cell surface proteins

Por de Souza, Jorge Estefano Santana, Galante, Pedro Alexandre Favoretto, de Almeida, Renan Valieris Bueno, da Cunha, Julia Pinheiro Chagas, Ohara, Daniel Takatori, Ohno-Machado, Lucila, Old, Lloyd J., de Souza, Sandro José
Publicado em 2012

Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis

Por da Silva, Vandeclecio Lira, Fonseca, André Faustino, Fonseca, Marbella, da Silva, Thayna Emilia, Coelho, Ana Carolina, Kroll, José Eduardo, de Souza, Jorge Estefano Santana, Stransky, Beatriz, de Souza, Gustavo Antonio, de Souza, Sandro José
Publicado no Oncotarget (2017)

The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms

Por Tanino, Motohiko, Debily, Marie-Anne, Tamura, Takuro, Hishiki, Teruyoshi, Ogasawara, Osamu, Murakawa, Katsuji, Kawamoto, Shoko, Itoh, Kouichi, Watanabe, Shinya, de Souza, Sandro José, Imbeaud, Sandrine, Graudens, Esther, Eveno, Eric, Hilton, Phillip, Sudo, Yukio, Kelso, Janet, Ikeo, Kazuho, Imanishi, Tadashi, Gojobori, Takashi, Auffray, Charles, Hide, Winston, Okubo, Kousaku
Publicado em 2005

A genomic case study of desmoplastic small round cell tumor: comprehensive analysis reveals insights into potential therapeutic targets and development of a monitoring tool for a r...

Por Ferreira, Elisa Napolitano, Barros, Bruna Durães Figueiredo, de Souza, Jorge Estefano, Almeida, Renan Valieris, Torrezan, Giovana Tardin, Garcia, Sheila, Krepischi, Ana Cristina Victorino, Mello, Celso Abdon Lopes de, Cunha, Isabela Werneck da, Pinto, Clóvis Antonio Lopes, Soares, Fernando Augusto, Dias-Neto, Emmanuel, Lopes, Ademar, de Souza, Sandro José, Carraro, Dirce Maria
Publicado no Hum Genomics (2016)

Identification of Variants (rs11571707, rs144848, and rs11571769) in the BRCA2 Gene Associated with Hereditary Breast Cancer in Indigenous Populations of the Brazilian Amazon

Por Dobbin, Elizabeth Ayres Fragoso, Medeiros, Jéssyca Amanda Gomes, Costa, Marta Solange Camarinha Ramos, Rodrigues, Juliana Carla Gomes, Guerreiro, João Farias, Kroll, José Eduardo, de Souza, Sandro José, de Assumpção, Paulo Pimentel, Ribeiro-dos-Santos, Ândrea, dos Santos, Sidney Emanuel Batista, Burbano, Rommel Mario Rodríguez, Fernandes, Marianne Rodrigues, dos Santos, Ney Pereira Carneiro
Publicado no Genes (Basel) (2021)

Whole Genome Sequencing of the Pirarucu (Arapaima gigas) Supports Independent Emergence of Major Teleost Clades

Por Vialle, Ricardo Assunção, de Souza, Jorge Estefano Santana, Lopes, Katia de Paiva, Teixeira, Diego Gomes, Alves Sobrinho, Pitágoras de Azevedo, Ribeiro-dos-Santos, André M, Furtado, Carolina, Sakamoto, Tetsu, Oliveira Silva, Fábio Augusto, Herculano Corrêa de Oliveira, Edivaldo, Hamoy, Igor Guerreiro, Assumpção, Paulo Pimentel, Ribeiro-dos-Santos, Ândrea, Santos Lima, João Paulo Matos, Seuánez, Héctor N, de Souza, Sandro José, Santos, Sidney
Publicado no Genome Biol Evol (2018)

Identification of NUDT15 gene variants in Amazonian Amerindians and admixed individuals from northern Brazil

Por Rodrigues, Juliana Carla Gomes, de Souza, Tatiane Piedade, Pastana, Lucas Favacho, Ribeiro dos Santos, André Maurício, Fernandes, Marianne Rodrigues, Pinto, Pablo, Wanderley, Alayde Vieira, de Souza, Sandro José, Kroll, José Eduardo, Pereira, Adenilson Leão, Magalhães, Leandro, Mercês, Laís Reis das, Vidal, Amanda Ferreira, Vinasco-Sandoval, Tatiana, Cavalcante, Giovanna Chaves, Guerreiro, João Farias, de Assumpção, Paulo Pimentel, Ribeiro-dos-Santos, Ândrea, Santos, Sidney, dos Santos, Ney Pereira Carneiro
Publicado no PLoS One (2020)