Regulatory RNAs: Charming gene management styles for synthetic biology applications

Por Vazquez-Anderson, Jorge, Contreras, Lydia M
Publicado em 2013

Optimizing Metabolite Production Using Periodic Oscillations

Por Sowa, Steven W., Baldea, Michael, Contreras, Lydia M.
Publicado em 2014

Small RNAs in mycobacteria: an unfolding story

Por Haning, Katie, Cho, Seung Hee, Contreras, Lydia M.
Publicado em 2014

Imposed Environmental Stresses Facilitate Cell-Free Nanoparticle Formation by Deinococcus radiodurans

Por Chen, Angela, Contreras, Lydia M., Keitz, Benjamin K.
Publicado no Appl Environ Microbiol (2017)

Transcriptional Analysis of Deinococcus radiodurans Reveals Novel Small RNAs That Are Differentially Expressed under Ionizing Radiation

Por Tsai, Chen-Hsun, Liao, Rick, Chou, Brendan, Contreras, Lydia M.
Publicado no Appl Environ Microbiol (2015)

Discovery of Ethanol-Responsive Small RNAs in Zymomonas mobilis

Por Cho, Seung Hee, Lei, Roy, Henninger, Trey D., Contreras, Lydia M.
Publicado em 2014

Genome-Wide Analyses in Bacteria Show Small-RNA Enrichment for Long and Conserved Intergenic Regions

Por Tsai, Chen-Hsun, Liao, Rick, Chou, Brendan, Palumbo, Michael, Contreras, Lydia M.
Publicado no J Bacteriol (2014)

Identification of Novel sRNAs in Mycobacterial Species

Por Tsai, Chen-Hsun, Baranowski, Catherine, Livny, Jonathan, McDonough, Kathleen A., Wade, Joseph T., Contreras, Lydia M.
Publicado em 2013

Identification and Characterization of 5′ Untranslated Regions (5′UTRs) in Zymomonas mobilis as Regulatory Biological Parts

Por Cho, Seung Hee, Haning, Katie, Shen, Wei, Blome, Cameron, Li, Runxia, Yang, Shihui, Contreras, Lydia M.
Publicado no Front Microbiol (2017)

A Genome-Wide Search for Ionizing-Radiation-Responsive Elements in Deinococcus radiodurans Reveals a Regulatory Role for the DNA Gyrase Subunit A Gene's 5′ Untranslated Region in t...

Por Villa, Jordan K., Amador, Paul, Janovsky, Justin, Bhuyan, Arijit, Saldanha, Roland, Lamkin, Thomas J., Contreras, Lydia M.
Publicado no Appl Environ Microbiol (2017)

Zymomonas mobilis as a model system for production of biofuels and biochemicals

Por Yang, Shihui, Fei, Qiang, Zhang, Yaoping, Contreras, Lydia M., Utturkar, Sagar M., Brown, Steven D., Himmel, Michael E., Zhang, Min
Publicado no Microb Biotechnol (2016)

Group II intron–ribosome association protects intron RNA from degradation

Por Contreras, Lydia M., Huang, Tao, Piazza, Carol Lyn, Smith, Dorie, Qu, Guosheng, Gelderman, Grant, Potratz, Jeffrey P., Russell, Rick, Belfort, Marlene
Publicado em 2013

Quaternary arrangement of an active, native group II intron ribonucleoprotein complex revealed by small-angle X-ray scattering

Por Gupta, Kushol, Contreras, Lydia M., Smith, Dorie, Qu, Guosheng, Huang, Tao, Spruce, Lynn A., Seeholzer, Steven H., Belfort, Marlene, Van Duyne, Gregory D.
Publicado em 2014

Exploiting post-transcriptional regulation to probe RNA structures in vivo via fluorescence

Por Sowa, Steven W., Vazquez-Anderson, Jorge, Clark, Chelsea A., De La Peña, Ricardo, Dunn, Kaitlin, Fung, Emily K., Khoury, Mark J., Contreras, Lydia M.
Publicado no Nucleic Acids Res (2015)

Integrative FourD omics approach profiles the target network of the carbon storage regulatory system

Por Sowa, Steven W., Gelderman, Grant, Leistra, Abigail N., Buvanendiran, Aishwarya, Lipp, Sarah, Pitaktong, Areen, Vakulskas, Christopher A., Romeo, Tony, Baldea, Michael, Contreras, Lydia M.
Publicado no Nucleic Acids Res (2017)

Optimization of a novel biophysical model using large scale in vivo antisense hybridization data displays improved prediction capabilities of structurally accessible RNA regions

Por Vazquez-Anderson, Jorge, Mihailovic, Mia K., Baldridge, Kevin C., Reyes, Kristofer G., Haning, Katie, Cho, Seung Hee, Amador, Paul, Powell, Warren B., Contreras, Lydia M.
Publicado no Nucleic Acids Res (2017)