Comparative transcriptomics and proteomics of three different aphid species identifies core and diverse effector sets

por Thorpe, Peter, Cock, Peter J. A., Bos, Jorunn
Publicado en BMC Genomics (2016)

Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology

por Cock, Peter J.A., Grüning, Björn A., Paszkiewicz, Konrad, Pritchard, Leighton
Publicado 2013

NCBI BLAST+ integrated into Galaxy

por Cock, Peter J. A., Chilton, John M., Grüning, Björn, Johnson, James E., Soranzo, Nicola
Publicado en Gigascience (2015)

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

por Cock, Peter J. A., Fields, Christopher J., Goto, Naohisa, Heuer, Michael L., Rice, Peter M.
Publicado 2010

The genome and genetics of a high oxidative stress tolerant Serratia sp. LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilus

por Vicente, Claudia S. L., Nascimento, Francisco X., Ikuyo, Yoriko, Cock, Peter J. A., Mota, Manuel, Hasegawa, Koichi
Publicado en BMC Genomics (2016)

The Bioinformatics Open Source Conference (BOSC) 2013

por Harris, Nomi L., Cock, Peter J. A., Chapman, Brad A., Goecks, Jeremy, Hotz, Hans-Rudolf, Lapp, Hilmar
Publicado en Bioinformatics (2015)

Gene expression changes in diapause or quiescent potato cyst nematode, Globodera pallida, eggs after hydration or exposure to tomato root diffusate

por Palomares-Rius, Juan Emilio, Hedley, Pete, Cock, Peter J.A., Morris, Jenny A., Jones, John T., Blok, Vivian C.
Publicado en PeerJ (2016)

Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy

por Espada, Margarida, Silva, Ana Cláudia, Eves van den Akker, Sebastian, Cock, Peter J. A., Mota, Manuel, Jones, John T.
Publicado en Mol Plant Pathol (2015)

Shared Transcriptional Control and Disparate Gain and Loss of Aphid Parasitism Genes

por Thorpe, Peter, Escudero-Martinez, Carmen M, Cock, Peter J A, Eves-van den Akker, Sebastian, Bos, Jorunn I B
Publicado en Genome Biol Evol (2018)

The 2015 Bioinformatics Open Source Conference (BOSC 2015)

por Harris, Nomi L., Cock, Peter J. A., Lapp, Hilmar, Chapman, Brad, Davey, Rob, Fields, Christopher, Hokamp, Karsten, Munoz-Torres, Monica
Publicado en PLoS Comput Biol (2016)

The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018)

por Harris, Nomi L., Wiencko, Heather, Chapman, Brad, Cock, Peter J.A., Hokamp, Karsten, Lapp, Hilmar, Fields, Chris, Greshake Tzovaras, Bastian
Publicado en F1000Res (2018)

Comparison of transcript profiles in different life stages of the nematode Globodera pallida under different host potato genotypes

por Palomares‐Rius, Juan E., Hedley, Pete E., Cock, Peter J. A., Morris, Jenny A., Jones, John T., Vovlas, Nikos, Blok, Vivian
Publicado en Mol Plant Pathol (2012)

The 2016 Bioinformatics Open Source Conference (BOSC)

por Harris, Nomi L., Cock, Peter J.A., Chapman, Brad, Fields, Christopher J., Hokamp, Karsten, Lapp, Hilmar, Muñoz-Torres, Monica, Wiencko, Heather
Publicado en F1000Res (2016)

Parallel Microbial Ecology of Pasteuria and Nematode Species in Scottish Soils

por Orr, Jamie N., Neilson, Roy, Freitag, Thomas E., Roberts, David M., Davies, Keith G., Blok, Vivian C., Cock, Peter J. A.
Publicado en Front Plant Sci (2020)

The 21st annual Bioinformatics Open Source Conference (BOSC 2020, part of BCC2020)

por Harris, Nomi L., Cock, Peter J.A., Fields, Christopher J., Hokamp, Karsten, Maia, Jessica, Munoz-Torres, Monica, Taschuk, Morgan, Yehudi, Yo
Publicado en F1000Res (2020)

The Transcriptome of Nacobbus aberrans Reveals Insights into the Evolution of Sedentary Endoparasitism in Plant-Parasitic Nematodes

por Eves-van den Akker, Sebastian, Lilley, Catherine J., Danchin, Etienne G. J., Rancurel, Corinne, Cock, Peter J. A., Urwin, Peter E., Jones, John T.
Publicado 2014

Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors

por MCNALLY, R. RYAN, TOTH, IAN K., COCK, PETER J. A., PRITCHARD, LEIGHTON, HEDLEY, PETE E., MORRIS, JENNY A., ZHAO, YOUFU, SUNDIN, GEORGE W.
Publicado en Mol Plant Pathol (2011)

Distinct Circular Single-Stranded DNA Viruses Exist in Different Soil Types

por Reavy, Brian, Swanson, Maud M., Cock, Peter J. A., Dawson, Lorna, Freitag, Thomas E., Singh, Brajesh K., Torrance, Lesley, Mushegian, Arcady R., Taliansky, Michael
Publicado en Appl Environ Microbiol (2015)

The 2017 Bioinformatics Open Source Conference (BOSC)

por Harris, Nomi L., Cock, Peter J.A., Chapman, Brad, Fields, Christopher J., Hokamp, Karsten, Lapp, Hilmar, Munoz-Torres, Monica, Tzovaras, Bastian Greshake, Wiencko, Heather
Publicado en F1000Res (2017)

FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation

por Bolleman, Jerven T., Mungall, Christopher J., Strozzi, Francesco, Baran, Joachim, Dumontier, Michel, Bonnal, Raoul J. P., Buels, Robert, Hoehndorf, Robert, Fujisawa, Takatomo, Katayama, Toshiaki, Cock, Peter J. A.
Publicado en J Biomed Semantics (2016)