A Combinatorial Approach to Detect Coevolved Amino Acid Networks in Protein Families of Variable Divergence

Por Baussand, Julie, Carbone, Alessandra
Publicado em 2009

Chromosomal periodicity and positional networks of genes in Escherichia coli

Por Mathelier, Anthony, Carbone, Alessandra
Publicado em 2010

Protein Fragments: Functional and Structural Roles of Their Coevolution Networks

Por Dib, Linda, Carbone, Alessandra
Publicado em 2012

CLAG: an unsupervised non hierarchical clustering algorithm handling biological data

Por Dib, Linda, Carbone, Alessandra
Publicado em 2012

Large scale chromosomal mapping of human microRNA structural clusters

Por Mathelier, Anthony, Carbone, Alessandra
Publicado em 2013

SPoRE: a mathematical model to predict double strand breaks and axis protein sites in meiosis

Por Champeimont, Raphaël, Carbone, Alessandra
Publicado no BMC Bioinformatics (2014)

Local Geometry and Evolutionary Conservation of Protein Surfaces Reveal the Multiple Recognition Patches in Protein-Protein Interactions

Por Laine, Elodie, Carbone, Alessandra
Publicado no PLoS Comput Biol (2015)

Protein social behavior makes a stronger signal for partner identification than surface geometry

Por Laine, Elodie, Carbone, Alessandra
Publicado no Proteins (2016)

Protein–protein interaction specificity is captured by contact preferences and interface composition

Por Nadalin, Francesca, Carbone, Alessandra
Publicado no Bioinformatics (2018)

Circuits and programmable self-assembling DNA structures

Por Carbone, Alessandra, Seeman, Nadrian C.
Publicado em 2002

A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models

Por Bernardes, Juliana S, Carbone, Alessandra, Zaverucha, Gerson
Publicado em 2011

SynChro: A Fast and Easy Tool to Reconstruct and Visualize Synteny Blocks along Eukaryotic Chromosomes

Por Drillon, Guénola, Carbone, Alessandra, Fischer, Gilles
Publicado em 2014

Dissecting protein architecture with communication blocks and communicating segment pairs

Por Karami, Yasaman, Laine, Elodie, Carbone, Alessandra
Publicado no BMC Bioinformatics (2016)

Plasmobase: a comparative database of predicted domain architectures for Plasmodium genomes

Por Bernardes, Juliana, Vaquero, Catherine, Carbone, Alessandra
Publicado no Malar J (2017)

Improvement in Protein Domain Identification Is Reached by Breaking Consensus, with the Agreement of Many Profiles and Domain Co-occurrence

Por Bernardes, Juliana, Zaverucha, Gerson, Vaquero, Catherine, Carbone, Alessandra
Publicado no PLoS Comput Biol (2016)

JET2 Viewer: a database of predicted multiple, possibly overlapping, protein–protein interaction sites for PDB structures

Por Ripoche, Hugues, Laine, Elodie, Ceres, Nicoletta, Carbone, Alessandra
Publicado no Nucleic Acids Res (2017)

JET2 Viewer: a database of predicted multiple, possibly overlapping, protein–protein interaction sites for PDB structures

Por Ripoche, Hugues, Laine, Elodie, Ceres, Nicoletta, Carbone, Alessandra
Publicado no Nucleic Acids Res (2017)

BIS2Analyzer: a server for co-evolution analysis of conserved protein families

Por Oteri, Francesco, Nadalin, Francesca, Champeimont, Raphaël, Carbone, Alessandra
Publicado no Nucleic Acids Res (2017)

A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling

Por Ugarte, Ari, Vicedomini, Riccardo, Bernardes, Juliana, Carbone, Alessandra
Publicado no Microbiome (2018)

DNA computing 11th international workshop on DNA computing, DNA11, London, on, Canada, june 6-9, 2005 ; revised selected papers /

Por International Workshop on DNA Computing, Carbone, Alessandra., Pierce, Niles A.
Publicado em 2006