D-MaPs - DNA-microarray projects: Web-based software for multi-platform microarray analysis

gan Carazzolle, Marcelo F., Herig, Taís S., Deckmann, Ana C., Pereira, Gonçalo A. G.
Cyhoeddwyd 2009

RNAsamba: neural network-based assessment of the protein-coding potential of RNA sequences

gan Camargo, Antonio P, Sourkov, Vsevolod, Pereira, Gonçalo A G, Carazzolle, Marcelo F
Cyhoeddwyd yn NAR Genom Bioinform (2020)

Large-scale analysis of differential gene expression in coffee genotypes resistant and susceptible to leaf miner–toward the identification of candidate genes for marker assisted-se...

gan Cardoso, Danielle C, Martinati, Juliana C, Giachetto, Poliana F, Vidal, Ramon O, Carazzolle, Marcelo F, Padilha, Lilian, Guerreiro-Filho, Oliveiro, Maluf, Mirian P
Cyhoeddwyd 2014

Identification of putative TAL effector targets of the citrus canker pathogens shows functional convergence underlying disease development and defense response

gan Pereira, Andre LA, Carazzolle, Marcelo F, Abe, Valeria Y, de Oliveira, Maria LP, Domingues, Mariane N, Silva, Jaqueline C, Cernadas, Raul A, Benedetti, Celso E
Cyhoeddwyd 2014

Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production

gan Carvalho-Netto, Osmar V, Carazzolle, Marcelo F, Mofatto, Luciana S, Teixeira, Paulo JPL, Noronha, Melline F, Calderón, Luige AL, Mieczkowski, Piotr A, Argueso, Juan Lucas, Pereira, Gonçalo AG
Cyhoeddwyd yn Microb Cell Fact (2015)

The genome sequence of <it>Propionibacterium acidipropionici</it> provides insights into its biotechnological and industrial potential

gan Parizzi Lucas P, Grassi Maria Carolina B, Llerena Luige A, Carazzolle Marcelo F, Queiroz Verônica L, Lunardi Inês, Zeidler Ane F, Teixeira Paulo JPL, Mieczkowski Piotr, Rincones Johana, Pereira Gonçalo AG
Cyhoeddwyd 2012-10-01

The genome sequence of Propionibacterium acidipropionici provides insights into its biotechnological and industrial potential

gan Parizzi, Lucas P, Grassi, Maria Carolina B, Llerena, Luige A, Carazzolle, Marcelo F, Queiroz, Verônica L, Lunardi, Inês, Zeidler, Ane F, Teixeira, Paulo JPL, Mieczkowski, Piotr, Rincones, Johana, Pereira, Gonçalo AG
Cyhoeddwyd 2012

Uncovering the mouse olfactory long non-coding transcriptome with a novel machine-learning model

gan Camargo, Antonio P, Nakahara, Thiago S, Firmino, Luiz E R, Netto, Paulo H M, do Nascimento, João B P, Donnard, Elisa R, Galante, Pedro A F, Carazzolle, Marcelo F, Malnic, Bettina, Papes, Fabio
Cyhoeddwyd yn DNA Res (2019)

An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora

gan Mondego, Jorge MC, Vidal, Ramon O, Carazzolle, Marcelo F, Tokuda, Eric K, Parizzi, Lucas P, Costa, Gustavo GL, Pereira, Luiz FP, Andrade, Alan C, Colombo, Carlos A, Vieira, Luiz GE, Pereira, Gonçalo AG
Cyhoeddwyd 2011

Deep Sequencing Reveals Differences in the Transcriptional Landscapes of Fibers from Two Cultivated Species of Cotton

gan Lacape, Jean-Marc, Claverie, Michel, Vidal, Ramon O., Carazzolle, Marcelo F., Guimarães Pereira, Gonçalo A., Ruiz, Manuel, Pré, Martial, Llewellyn, Danny, Al-Ghazi, Yves, Jacobs, John, Dereeper, Alexis, Huguet, Stéphanie, Giband, Marc, Lanaud, Claire
Cyhoeddwyd 2012

Draft Whole-Genome Sequences of Haemophilus influenzae Biogroup aegyptius Strains Isolated from Five Brazilian Purpuric Fever Cases and One Conjunctivitis Case

gan Pereira, Rafaella F. C., Mofatto, Luciana S., Silva, Ana C. A., Alves, Danilo A., Machado, Daisy, Theizen, Thaís H., Pereira, Gonçalo A. G., Levy, Carlos E., de Hollanda, Luciana M., Carazzolle, Marcelo F., Lancellotti, Marcelo
Cyhoeddwyd yn Microbiol Resour Announc (2019)

Functional characterization and target discovery of glycoside hydrolases from the digestome of the lower termite Coptotermes gestroi

gan Franco Cairo, João Paulo L, Leonardo, Flávia C, Alvarez, Thabata M, Ribeiro, Daniela A, Büchli, Fernanda, Costa-Leonardo, Ana M, Carazzolle, Marcelo F, Costa, Fernando F, Paes Leme, Adriana F, Pereira, Gonçalo AG, Squina, Fabio M
Cyhoeddwyd 2011

Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylation

gan Maldonado, Mariângela B. C., de Rezende Neto, Nelson B., Nagamatsu, Sheila T., Carazzolle, Marcelo F., Hoff, Jesse L., Whitacre, Lynsey K., Schnabel, Robert D., Behura, Susanta K., McKay, Stephanie D., Taylor, Jeremy F., Lopes, Flavia L.
Cyhoeddwyd yn PLoS One (2019)

Unraveling the complex genome of Saccharum spontaneum using Polyploid Gene Assembler

gan Nascimento, Leandro Costa, Yanagui, Karina, Jose, Juliana, Camargo, Eduardo L O, Grassi, Maria Carolina B, Cunha, Camila P, Bressiani, José Antonio, Carvalho, Guilherme M A, Carvalho, Carlos Roberto, Prado, Paula F, Mieczkowski, Piotr, Pereira, Gonçalo A G, Carazzolle, Marcelo F
Cyhoeddwyd yn DNA Res (2019)

Transcriptional Activity, Chromosomal Distribution and Expression Effects of Transposable Elements in Coffea Genomes

gan Lopes, Fabrício R., Jjingo, Daudi, da Silva, Carlos R. M., Andrade, Alan C., Marraccini, Pierre, Teixeira, João B., Carazzolle, Marcelo F., Pereira, Gonçalo A. G., Pereira, Luiz Filipe P., Vanzela, André L. L., Wang, Lu, Jordan, I. King, Carareto, Claudia M. A.
Cyhoeddwyd 2013

Adaptive evolution of Moniliophthora PR-1 proteins towards its pathogenic lifestyle

gan Vasconcelos, Adrielle A., José, Juliana, Tokimatu, Paulo M., Camargo, Antonio P., Teixeira, Paulo J. P. L., Thomazella, Daniela P. T., do Prado, Paula F. V., Fiorin, Gabriel L., Costa, Juliana L., Figueira, Antonio, Carazzolle, Marcelo F., Pereira, Gonçalo A. G., Baroni, Renata M.
Cyhoeddwyd yn BMC Ecol Evol (2021)

Identification of novel soybean microRNAs involved in abiotic and biotic stresses

gan Nascimento Leandro C, Abdelnoor Ricardo V, Marcelino-Guimarães Francismar C, Nepomuceno Alexandre L, Stolf-Moreira Renata, Barbosa Joice F, Marcolino Juliana, Rodrigues Fabiana A, Almerão Maurício P, Molina Lorrayne G, de Oliveira Luiz FV, Kulcheski Franceli R, Carazzolle Marcelo F, Pereira Gonçalo AG, Margis Rogério
Cyhoeddwyd 2011-06-01

Identification of novel soybean microRNAs involved in abiotic and biotic stresses

gan Kulcheski, Franceli R, de Oliveira, Luiz FV, Molina, Lorrayne G, Almerão, Maurício P, Rodrigues, Fabiana A, Marcolino, Juliana, Barbosa, Joice F, Stolf-Moreira, Renata, Nepomuceno, Alexandre L, Marcelino-Guimarães, Francismar C, Abdelnoor, Ricardo V, Nascimento, Leandro C, Carazzolle, Marcelo F, Pereira, Gonçalo AG, Margis, Rogério
Cyhoeddwyd 2011

Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome

gan Ambrosio, Alinne Batista, do Nascimento, Leandro Costa, Oliveira, Bruno V, L Teixeira, Paulo José P, Tiburcio, Ricardo A, Toledo Thomazella, Daniela P, Leme, Adriana F P, Carazzolle, Marcelo F, Vidal, Ramon O, Mieczkowski, Piotr, Meinhardt, Lyndel W, Pereira, Gonçalo A G, Cabrera, Odalys G
Cyhoeddwyd 2013

MEF2C repressor variant deregulation leads to cell cycle re-entry and development of heart failure

gan Pereira, Ana Helena M., Cardoso, Alisson C., Consonni, Silvio R., Oliveira, Renata R., Saito, Angela, Vaggione, Maria Luisa B., Matos-Souza, Jose R., Carazzolle, Marcelo F., Gonçalves, Anderson, Fernandes, Juliano L., Ribeiro, Gustavo C.A., Lopes, Mauricio M., Molkentin, Jeffery D., Franchini, Kleber G.
Cyhoeddwyd yn EBioMedicine (2020)