Protein hyperproduction in fungi by design

by Baker, Scott E.
Published in Appl Microbiol Biotechnol (2018)

Draft Genome Sequence of the Dimorphic Yeast Yarrowia lipolytica Strain W29

by Pomraning, Kyle R., Baker, Scott E.
Published in Genome Announc (2015)

Diverse data supports the transition of filamentous fungal model organisms into the post-genomics era

by McCluskey, Kevin, Baker, Scott E.
Published in Mycology (2017)

Regulation of Nitrogen Metabolism by GATA Zinc Finger Transcription Factors in Yarrowia lipolytica

by Pomraning, Kyle R., Bredeweg, Erin L., Baker, Scott E.
Published in mSphere (2017)

Regulation of amino-acid metabolism controls flux to lipid accumulation in Yarrowia lipolytica

by Kerkhoven, Eduard J, Pomraning, Kyle R, Baker, Scott E, Nielsen, Jens
Published in NPJ Syst Biol Appl (2016)

Comparative Genomic Analysis of Ochratoxin A Biosynthetic Cluster in Producing Fungi: New Evidence of a Cyclase Gene Involvement

by Ferrara, Massimo, Gallo, Antonia, Perrone, Giancarlo, Magistà, Donato, Baker, Scott E.
Published in Front Microbiol (2020)

The Polyketide Synthase Gene pks4 of Trichoderma reesei Provides Pigmentation and Stress Resistance

by Atanasova, Lea, Knox, Benjamin P., Kubicek, Christian P., Druzhinina, Irina S., Baker, Scott E.
Published 2013

Activation of an AP1-Like Transcription Factor of the Maize Pathogen Cochliobolus heterostrophus in Response to Oxidative Stress and Plant Signals

by Lev, Sophie, Hadar, Ruthi, Amedeo, Paolo, Baker, Scott E., Yoder, O. C., Horwitz, Benjamin A.
Published 2005

New Insight into the Ochratoxin A Biosynthetic Pathway through Deletion of a Nonribosomal Peptide Synthetase Gene in Aspergillus carbonarius

by Gallo, Antonia, Bruno, Kenneth S., Solfrizzo, Michele, Perrone, Giancarlo, Mulè, Giuseppina, Visconti, Angelo, Baker, Scott E.
Published 2012

A molecular genetic toolbox for Yarrowia lipolytica

by Bredeweg, Erin L., Pomraning, Kyle R., Dai, Ziyu, Nielsen, Jens, Kerkhoven, Eduard J., Baker, Scott E.
Published in Biotechnol Biofuels (2017)

Erratum to: A molecular genetic toolbox for Yarrowia lipolytica

by Bredeweg, Erin L., Pomraning, Kyle R., Dai, Ziyu, Nielsen, Jens, Kerkhoven, Eduard J., Baker, Scott E.
Published in Biotechnol Biofuels (2017)

A Cell Signal Pathway Involving Laminin-5, α3β1 Integrin, and Mitogen-activated Protein Kinase Can Regulate Epithelial Cell Proliferation

by Gonzales, Meredith, Haan, Keith, Baker, Scott E., Fitchmun, Mark, Todorov, Ivan, Weitzman, Sigmund, Jones, Jonathan C.R.
Published 1999

Characterization of a polyketide synthase in Aspergillus niger whose product is a precursor for both dihydroxynaphthalene (DHN) melanin and naphtho-γ-pyrone

by Chiang, Yi-Ming, Meyer, Kristen M., Praseuth, Michael, Baker, Scott E., Bruno, Kenneth S., Wang, Clay C. C.
Published 2010

A versatile toolkit for high throughput functional genomics with Trichoderma reesei

by Schuster, André, Bruno, Kenneth S, Collett, James R, Baker, Scott E, Seiboth, Bernhard, Kubicek, Christian P, Schmoll, Monika
Published 2012

period-1 encodes an ATP-dependent RNA helicase that influences nutritional compensation of the Neurospora circadian clock

by Emerson, Jillian M., Bartholomai, Bradley M., Ringelberg, Carol S., Baker, Scott E., Loros, Jennifer J., Dunlap, Jay C.
Published in Proc Natl Acad Sci U S A (2015)

Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa

by McCluskey, Kevin, Wiest, Aric E., Grigoriev, Igor V., Lipzen, Anna, Martin, Joel, Schackwitz, Wendy, Baker, Scott E.
Published 2011

Forward genetics screen coupled with whole-genome resequencing identifies novel gene targets for improving heterologous enzyme production in Aspergillus niger

by Reilly, Morgann C., Kim, Joonhoon, Lynn, Jed, Simmons, Blake A., Gladden, John M., Magnuson, Jon K., Baker, Scott E.
Published in Appl Microbiol Biotechnol (2018)

Compartmentalized microchannel array for high-throughput analysis of single cell polarized growth and dynamics

by Geng, Tao, Bredeweg, Erin L., Szymanski, Craig J., Liu, Bingwen, Baker, Scott E., Orr, Galya, Evans, James E., Kelly, Ryan T.
Published in Sci Rep (2015)

Prediction of Metabolite Concentrations, Rate Constants and Post-Translational Regulation Using Maximum Entropy-Based Simulations with Application to Central Metabolism of Neurospo...

by Cannon, William R., Zucker, Jeremy D., Baxter, Douglas J., Kumar, Neeraj, Baker, Scott E., Hurley, Jennifer M., Dunlap, Jay C.
Published in Processes (Basel) (2018)

Genome Sequence of the Mucoromycotina Fungus Umbelopsis isabellina, an Effective Producer of Lipids

by Takeda, Itaru, Tamano, Koichi, Yamane, Noriko, Ishii, Tomoko, Miura, Ai, Umemura, Myco, Terai, Goro, Baker, Scott E., Koike, Hideaki, Machida, Masayuki
Published 2014