Computationally Driven Experimental Biology

Por Murali, T.M.
Publicado em 2012

Expression Divergence of Tandemly Arrayed Genes in Human and Mouse

Por Shoja, Valia, Murali, T. M., Zhang, Liqing
Publicado em 2007

Pathway Analysis with Signaling Hypergraphs

Por Ritz, Anna, Avent, Brendan, Murali, T. M.
Publicado no IEEE/ACM Trans Comput Biol Bioinform (2017)

VIRGO: computational prediction of gene functions

Por Massjouni, Naveed, Rivera, Corban G., Murali, T. M.
Publicado em 2006

Discovering Networks of Perturbed Biological Processes in Hepatocyte Cultures

Por Lasher, Christopher D., Rajagopalan, Padmavathy, Murali, T. M.
Publicado em 2011

The Landscape of Host Transcriptional Response Programs Commonly Perturbed by Bacterial Pathogens: Towards Host-Oriented Broad-Spectrum Drug Targets

Por Kidane, Yared H., Lawrence, Christopher, Murali, T. M.
Publicado em 2013

Summarizing cellular responses as biological process networks

Por Lasher, Christopher D, Rajagopalan, Padmavathy, Murali, T M
Publicado em 2013

Computational approaches for discovery of common immunomodulators in fungal infections: towards broad-spectrum immunotherapeutic interventions

Por Kidane, Yared H, Lawrence, Christopher, Murali, T M
Publicado em 2013

Xtalk: a path-based approach for identifying crosstalk between signaling pathways

Por Tegge, Allison N., Sharp, Nicholas, Murali, T. M.
Publicado no Bioinformatics (2016)

Reconstructing signaling pathways using regular language constrained paths

Por Wagner, Mitchell J, Pratapa, Aditya, Murali, T M
Publicado no Bioinformatics (2019)

The Landscape of Human Proteins Interacting with Viruses and Other Pathogens

Por Dyer, Matthew D, Murali, T. M, Sobral, Bruno W
Publicado em 2008

The PathLinker app: Connect the dots in protein interaction networks

Por Gil, Daniel P., Law, Jeffrey N., Murali, T. M.
Publicado no F1000Res (2017)

Automating the PathLinker app for Cytoscape

Por Huang, Li Jun, Law, Jeffrey N., Murali, T. M.
Publicado no F1000Res (2018)

Hypergraph-based connectivity measures for signaling pathway topologies

Por Franzese, Nicholas, Groce, Adam, Murali, T. M., Ritz, Anna
Publicado no PLoS Comput Biol (2019)

Supervised learning and prediction of physical interactions between human and HIV proteins

Por Dyer, Matthew D., Murali, T.M., Sobral, Bruno W.
Publicado em 2011

PIG—the pathogen interaction gateway

Por Driscoll, Tim, Dyer, Matthew D., Murali, T. M., Sobral, Bruno W.
Publicado em 2009

Designing a Multicellular Organotypic 3D Liver Model with a Detachable, Nanoscale Polymeric Space of Disse

Por Larkin, Adam L., Rodrigues, Richard R., Murali, T.M., Rajagopalan, Padmavathy
Publicado em 2013

Signaling Hypergraphs

Por Ritz, Anna, Tegge, Allison, Kim, Hyunju, Poirel, Christopher L., Murali, T. M.
Publicado no Trends Biotechnol (2014)

Large-scale protein function prediction using heterogeneous ensembles

Por Wang, Linhua, Law, Jeffrey, Kale, Shiv D., Murali, T. M., Pandey, Gaurav
Publicado no F1000Res (2018)

From START to FINISH: computational analysis of cell cycle control in budding yeast

Por Kraikivski, Pavel, Chen, Katherine C, Laomettachit, Teeraphan, Murali, T M, Tyson, John J
Publicado no NPJ Syst Biol Appl (2015)