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Algorithm theory – SWAT 2008 11th Scandinavian Workshop on Algorithm Theory, Gothenburg, Sweden, July 2-4, 2008 : proceedings /
Algorithm Theory-SWAT 2006 10th Scandinavian Workshop on Algorithm Theory, Riga, Latvia, July 6-8, 2006, proceedings /

Fast-SG: an alignment-free algorithm for hybrid assembly
hybridSPAdes: an algorithm for hybrid assembly of short and long reads

ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data
A new pheromone trail-based genetic algorithm for comparative genome assembly

GAGE: A critical evaluation of genome assemblies and assembly algorithms
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Benchmarking of next and third generation sequencing technologies and their associated algorithms for de novo genome assembly
Algorithms for automated DNA assembly

A safe and complete algorithm for metagenomic assembly
An algorithm to generate low-resolution protein tertiary structures from knowledge of secondary structure.

Algorithmic design of self-assembling structures
An algorithm for automated closure during assembly

An algorithm for automated closure during assembly
An accelerated Photo-Magnetic Imaging reconstruction algorithm based on an analytical forward solution and a fast Jacobian assembly method

Self-adaptive multiscaling algorithm for efficient simulations of many-protein systems in crowded conditions
AN ALGORITHM FOR ASSEMBLING A COMMON IMAGE OF VLSI LAYOUT

A divide-and-conquer algorithm for large-scale de novo transcriptome assembly through combining small assemblies from existing algorithms
Design Principles of Regulatory Networks: Searching for the Molecular Algorithms of the Cell

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